5 items (Streptococcus iniae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bug4	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)
	APD31338.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
	APD31339.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	APD31340.1	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (356 aa)
	APD31341.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (307 aa)

Your Current Organism:

Streptococcus iniae

NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD31338.1	APD31339.1	BMF34_02245	BMF34_02250	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APD31338.1	APD31340.1	BMF34_02245	BMF34_02255	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.981
APD31338.1	APD31341.1	BMF34_02245	BMF34_02260	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.979
APD31338.1	bug4	BMF34_02245	BMF34_02240	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
APD31339.1	APD31338.1	BMF34_02250	BMF34_02245	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APD31339.1	APD31340.1	BMF34_02250	BMF34_02255	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.982
APD31339.1	APD31341.1	BMF34_02250	BMF34_02260	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.979
APD31339.1	bug4	BMF34_02250	BMF34_02240	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
APD31340.1	APD31338.1	BMF34_02255	BMF34_02245	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
APD31340.1	APD31339.1	BMF34_02255	BMF34_02250	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
APD31340.1	APD31341.1	BMF34_02255	BMF34_02260	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.931
APD31340.1	bug4	BMF34_02255	BMF34_02240	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
APD31341.1	APD31338.1	BMF34_02260	BMF34_02245	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APD31341.1	APD31339.1	BMF34_02260	BMF34_02250	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
APD31341.1	APD31340.1	BMF34_02260	BMF34_02255	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.931
APD31341.1	bug4	BMF34_02260	BMF34_02240	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
bug4	APD31338.1	BMF34_02240	BMF34_02245	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
bug4	APD31339.1	BMF34_02240	BMF34_02250	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
bug4	APD31340.1	BMF34_02240	BMF34_02255	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide transport ATP-binding protein AmiE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.954
bug4	APD31341.1	BMF34_02240	BMF34_02260	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.950