Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APD31217.1 | APD31638.1 | BMF34_01555 | BMF34_03890 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
| APD31217.1 | APD31865.1 | BMF34_01555 | BMF34_05115 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
| APD31638.1 | APD31217.1 | BMF34_03890 | BMF34_01555 | Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.533 |
| APD31638.1 | APD31640.1 | BMF34_03890 | BMF34_03900 | Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APD31638.1 | accC | BMF34_03890 | BMF34_08195 | Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.676 |
| APD31638.1 | ackA | BMF34_03890 | BMF34_00955 | Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.403 |
| APD31640.1 | APD31638.1 | BMF34_03900 | BMF34_03890 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| APD31640.1 | APD31915.1 | BMF34_03900 | BMF34_05370 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | hydroxymethylglutaryl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APD31640.1 | accA | BMF34_03900 | BMF34_08185 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.521 |
| APD31640.1 | accC | BMF34_03900 | BMF34_08195 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.622 |
| APD31640.1 | accD | BMF34_03900 | BMF34_08190 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.553 |
| APD31640.1 | ackA | BMF34_03900 | BMF34_00955 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.639 |
| APD31640.1 | citE | BMF34_03900 | BMF34_01965 | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Citrate (pro-3S)-lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. | 0.490 |
| APD31777.1 | coaA | BMF34_04640 | BMF34_04570 | Phosphopantothenate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type I pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.580 |
| APD31777.1 | coaC | BMF34_04640 | BMF34_04635 | Phosphopantothenate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopantothenoylcysteine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| APD31777.1 | coaD | BMF34_04640 | BMF34_02740 | Phosphopantothenate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.517 |
| APD31777.1 | coaE | BMF34_04640 | BMF34_06850 | Phosphopantothenate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.556 |
| APD31865.1 | APD31217.1 | BMF34_05115 | BMF34_01555 | GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.807 |
| APD31915.1 | APD31640.1 | BMF34_05370 | BMF34_03900 | hydroxymethylglutaryl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APD31915.1 | APD31916.1 | BMF34_05370 | BMF34_05375 | hydroxymethylglutaryl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | hydroxymethylglutaryl-CoA reductase, degradative; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family. | 0.998 |
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