13 items (Streptococcus iniae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APD31631.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	APD31768.1	BMP family ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
	APD32498.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	APD32701.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	APD32268.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	ccpA	Catabolite control protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	APD31116.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	APD31117.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	APD31156.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	BMF34_01600	Pullulanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	APD31420.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	APD31425.1	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	APD31600.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)

Your Current Organism:

Streptococcus iniae

NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD31116.1	APD31117.1	BMF34_01010	BMF34_01015	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
APD31117.1	APD31116.1	BMF34_01015	BMF34_01010	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
APD31156.1	APD31425.1	BMF34_01215	BMF34_02775	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
APD31156.1	APD31600.1	BMF34_01215	BMF34_03695	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
APD31156.1	BMF34_01600	BMF34_01215	BMF34_01600	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pullulanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
APD31420.1	APD31425.1	BMF34_02750	BMF34_02775	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
APD31425.1	APD31156.1	BMF34_02775	BMF34_01215	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
APD31425.1	APD31420.1	BMF34_02775	BMF34_02750	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
APD31425.1	APD31600.1	BMF34_02775	BMF34_03695	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
APD31425.1	APD32498.1	BMF34_02775	BMF34_08485	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
APD31425.1	APD32701.1	BMF34_02775	BMF34_09555	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
APD31425.1	BMF34_01600	BMF34_02775	BMF34_01600	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pullulanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
APD31425.1	ccpA	BMF34_02775	BMF34_06770	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catabolite control protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
APD31600.1	APD31156.1	BMF34_03695	BMF34_01215	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
APD31600.1	APD31425.1	BMF34_03695	BMF34_02775	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.487
APD32498.1	APD31425.1	BMF34_08485	BMF34_02775	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
APD32701.1	APD31425.1	BMF34_09555	BMF34_02775	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
APD32701.1	BMF34_01600	BMF34_09555	BMF34_01600	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pullulanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
BMF34_01600	APD31156.1	BMF34_01600	BMF34_01215	Pullulanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
BMF34_01600	APD31425.1	BMF34_01600	BMF34_02775	Pullulanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose ABC transporter substrate-binding protein; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474