6 items (Streptococcus iniae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APD31918.1	Phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
	thrB	Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (286 aa)
	APD31089.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. IspE subfamily. (283 aa)
	galK	Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (387 aa)
	mvk	Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	mvaD	Diphosphomevalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)

Your Current Organism:

Streptococcus iniae

NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APD31918.1	mvaD	BMF34_05385	BMF34_05390	Phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diphosphomevalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
APD31918.1	mvk	BMF34_05385	BMF34_05395	Phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
mvaD	APD31918.1	BMF34_05390	BMF34_05385	Diphosphomevalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
mvaD	mvk	BMF34_05390	BMF34_05395	Diphosphomevalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
mvk	APD31918.1	BMF34_05395	BMF34_05385	Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
mvk	mvaD	BMF34_05395	BMF34_05390	Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diphosphomevalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989