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APD32658.1 APD32658.1 APD32618.1 APD32618.1 APD32614.1 APD32614.1 rfbD rfbD pgmA pgmA APD31753.1 APD31753.1 rfbB rfbB APD31623.1 APD31623.1 rfbA rfbA APD31431.1 APD31431.1 APD31252.1 APD31252.1 APD32657.1 APD32657.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APD32658.1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
APD32618.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
APD32614.1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (284 aa)
pgmAPhosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
APD31753.1Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
rfbBdTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (348 aa)
APD31623.1dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (289 aa)
APD31431.1Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
APD31252.1Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
APD32657.1RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
Your Current Organism:
Streptococcus iniae
NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW
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