Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APD31134.1 | APD31171.1 | BMF34_01100 | BMF34_01295 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
| APD31134.1 | APD31177.1 | BMF34_01100 | BMF34_01330 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.450 |
| APD31134.1 | APD31968.1 | BMF34_01100 | BMF34_05655 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH/MDH superfamily. | 0.453 |
| APD31134.1 | ldh | BMF34_01100 | BMF34_04975 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.550 |
| APD31134.1 | lpdA | BMF34_01100 | BMF34_03905 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| APD31134.1 | pflB | BMF34_01100 | BMF34_08625 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.563 |
| APD31134.1 | pta | BMF34_01100 | BMF34_05100 | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
| APD31171.1 | APD31134.1 | BMF34_01295 | BMF34_01100 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
| APD31171.1 | APD31177.1 | BMF34_01295 | BMF34_01330 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.603 |
| APD31171.1 | APD31664.1 | BMF34_01295 | BMF34_04025 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| APD31171.1 | APD32404.1 | BMF34_01295 | BMF34_07995 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
| APD31171.1 | APD32444.1 | BMF34_01295 | BMF34_08205 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.449 |
| APD31171.1 | accC | BMF34_01295 | BMF34_08195 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.474 |
| APD31171.1 | accD | BMF34_01295 | BMF34_08190 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.448 |
| APD31171.1 | ackA | BMF34_01295 | BMF34_00955 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.509 |
| APD31171.1 | cutC | BMF34_01295 | BMF34_01275 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Choline trimethylamine-lyase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | 0.713 |
| APD31171.1 | lpdA | BMF34_01295 | BMF34_03905 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.596 |
| APD31171.1 | pflB | BMF34_01295 | BMF34_08625 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Formate C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
| APD31171.1 | pta | BMF34_01295 | BMF34_05100 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| APD31177.1 | APD31134.1 | BMF34_01330 | BMF34_01100 | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
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