STRINGSTRING
glcD glcD ACPL_3078 ACPL_3078 glcF glcF glcE glcE aceA aceA ACPL_5158 ACPL_5158 ACPL_6612 ACPL_6612
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glcDGlycolate oxidase; FAD/FMN-containing dehydrogenases. (486 aa)
ACPL_3078Glycolate oxidase FAD binding subunit; FAD/FMN-containing dehydrogenases. (373 aa)
glcFPutative glycolate oxidase iron-sulfur subunit; Fe-S oxidoreductase. (458 aa)
glcEGlycolate oxidase FAD binding subunit; FAD/FMN-containing dehydrogenases. (375 aa)
aceAIsocitrate lyase. (428 aa)
ACPL_5158Malate synthase; Belongs to the malate synthase family. (540 aa)
ACPL_6612Malate synthase. (511 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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