STRINGSTRING
ACPL_2041 ACPL_2041 rbsA rbsA ACPL_2043 ACPL_2043 rbsC rbsC lsrC lsrC rbsC-2 rbsC-2 ACPL_2453 ACPL_2453 ACPL_2454 ACPL_2454 rbsA-2 rbsA-2 lsrC-2 lsrC-2 ACPL_4169 ACPL_4169 ACPL_4170 ACPL_4170 ACPL_5442 ACPL_5442 ACPL_5443 ACPL_5443 ACPL_5444 ACPL_5444 ACPL_5445 ACPL_5445
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACPL_2041HTH-type transcriptional repressor purR; Transcriptional regulators. (363 aa)
rbsARibose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (503 aa)
ACPL_2043Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (320 aa)
rbsCRibose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (328 aa)
lsrCAutoinducer 2 import system permease protein lsrC; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (343 aa)
rbsC-2Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (318 aa)
ACPL_2453Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (499 aa)
ACPL_2454Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component. (342 aa)
rbsA-2Ribose transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (501 aa)
lsrC-2Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (334 aa)
ACPL_4169Monosaccharide-transporting ATPase; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (358 aa)
ACPL_4170Autoinducer 2-binding protein lsrB; ABC-type sugar transport system, periplasmic component. (346 aa)
ACPL_5442Inner membrane ABC transporter permease protein YjfF; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (340 aa)
ACPL_5443Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (339 aa)
ACPL_5444Simple sugar transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (510 aa)
ACPL_5445HTH-type transcriptional repressor purR; Transcriptional regulators. (332 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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