STRINGSTRING
ACPL_5518 ACPL_5518 ACPL_1479 ACPL_1479 ACPL_3005 ACPL_3005 abfB abfB ACPL_5480 ACPL_5480 abfA abfA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACPL_5518alpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase. (819 aa)
ACPL_1479Putative hydrolase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (824 aa)
ACPL_3005Endoglucanase. (463 aa)
abfBArabinofuranosidase; Beta-1,4-xylanase. (776 aa)
ACPL_5480Hypothetical protein. (326 aa)
abfAalpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase. (502 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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