STRINGSTRING
recG recG trcF trcF lhr lhr ACPL_717 ACPL_717 ACPL_708 ACPL_708 ACPL_6666 ACPL_6666 ACPL_6614 ACPL_6614 recQ-2 recQ-2 ACPL_5928 ACPL_5928 deaD deaD hrpA hrpA secA-2 secA-2 ACPL_526 ACPL_526 ACPL_5222 ACPL_5222 ACPL_484 ACPL_484 ACPL_4436 ACPL_4436 ACPL_438 ACPL_438 ddx5 ddx5 recQ recQ helZ helZ uvrB uvrB secA secA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
recGRecG-like helicase. (726 aa)
trcFTranscription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1203 aa)
lhrLhr-like helicases. (1652 aa)
ACPL_717Pre-mRNA-processing ATP-dependent RNA helicase PRP5; Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (648 aa)
ACPL_708Superfamily II DNA helicase. (708 aa)
ACPL_6666Pre-mRNA-processing ATP-dependent RNA helicase PRP5; Superfamily II DNA and RNA helicases. (591 aa)
ACPL_6614ATP-dependent helicase HrpB; HrpA-like helicases. (863 aa)
recQ-2Superfamily II DNA helicase. (554 aa)
ACPL_5928F-box DNA helicase protein 1; DNA methylase. (5399 aa)
deaDCold-shock DEAD box protein A; Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (569 aa)
hrpAHrpA-like helicases. (1307 aa)
secA-2Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (763 aa)
ACPL_526DNA excision repair protein ERCC-3; DNA or RNA helicases of superfamily II. (548 aa)
ACPL_5222Superfamily II RNA helicase. (918 aa)
ACPL_484Putative ATP-dependent helicase HRQ1; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster. (850 aa)
ACPL_4436DEAD/DEAH box helicase domain protein; Superfamily II RNA helicase. (829 aa)
ACPL_438Non-specific serine/threonine protein kinase; Superfamily II DNA/RNA helicases, SNF2 family. (1016 aa)
ddx5DEAD/DEAH box helicase domain-containing protein; Superfamily II DNA and RNA helicases. (659 aa)
recQSuperfamily II DNA helicase. (775 aa)
helZHelicase HelZ; Superfamily II DNA/RNA helicases, SNF2 family. (1132 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (733 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (970 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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