STRINGSTRING
rmlC rmlC iolB iolB ACPL_2383 ACPL_2383 hmgA hmgA eshA eshA ACPL_1681 ACPL_1681 mpi mpi ACPL_6683 ACPL_6683 ACPL_6602 ACPL_6602 mpi-2 mpi-2 hlyX hlyX ACPL_6197 ACPL_6197 cdo1 cdo1 ACPL_5514 ACPL_5514 ACPL_7597 ACPL_7597 ACPL_7538 ACPL_7538 etr1-3 etr1-3 ACPL_3355 ACPL_3355 ACPL_5378 ACPL_5378 ACPL_4421 ACPL_4421 ACPL_4417 ACPL_4417 ACPL_3588 ACPL_3588 ACPL_3701 ACPL_3701
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes. (203 aa)
iolB5-deoxy-glucuronate isomerase; Uncharacterized enzyme involved in inositol metabolism. (293 aa)
ACPL_2383Hypothetical protein; Predicted enzyme of the cupin superfamily. (109 aa)
hmgAHomogentisate 1,2-dioxygenase. (391 aa)
eshAcAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (469 aa)
ACPL_1681Anaerobic regulatory protein; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (228 aa)
mpiPhosphomannose isomerase. (394 aa)
ACPL_6683Uncharacterized conserved protein, contains double-stranded beta-helix domain. (124 aa)
ACPL_6602Pirin-related protein; Belongs to the pirin family. (316 aa)
mpi-2Phosphomannose isomerase. (397 aa)
hlyXRegulatory protein hlyX; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (225 aa)
ACPL_6197Hypothetical protein; Isopropylmalate/homocitrate/citramalate synthases. (123 aa)
cdo1Cysteine dioxygenase type 1; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily. (156 aa)
ACPL_5514ydcN-like uncharacterized HTH-type transcriptional regulator; Predicted transcriptional regulators. (187 aa)
ACPL_7597ydcN-like uncharacterized HTH-type transcriptional regulator; Predicted transcriptional regulators. (189 aa)
ACPL_7538Cyclic nucleotide-binding protein; Zn-dependent proteases. (1041 aa)
etr1-3Signal transduction histidine kinase. (489 aa)
ACPL_3355HTH-type transcriptional activator rhaS; AraC-type DNA-binding domain-containing proteins. (279 aa)
ACPL_5378Uncharacterized conserved protein, contains double-stranded beta-helix domain. (111 aa)
ACPL_4421Hypothetical protein. (113 aa)
ACPL_4417Predicted transcriptional regulators. (191 aa)
ACPL_3588Hypothetical protein; Mannose-6-phosphate isomerase. (138 aa)
ACPL_3701HTH-type transcriptional activator rhaS; AraC-type DNA-binding domain-containing proteins. (251 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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