STRINGSTRING
abnA abnA ACPL_3008 ACPL_3008 ACPL_3369 ACPL_3369 ACPL_5519 ACPL_5519 ACPL_3775 ACPL_3775 ACPL_3660 ACPL_3660
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
abnAArabinan endo-1,5-alpha-L-arabinosidase; Beta-xylosidase. (320 aa)
ACPL_3008Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (454 aa)
ACPL_3369Hypothetical protein; FOG: PKD repeat. (1192 aa)
ACPL_5519alpha-N-arabinofuranosidase; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (460 aa)
ACPL_3775Glycoside hydrolase family 43; Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (465 aa)
ACPL_3660Glycoside hydrolase family protein; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (500 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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