STRINGSTRING
dapD dapD ACPL_3365 ACPL_3365 ACPL_3130 ACPL_3130 ACPL_7742 ACPL_7742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dapD2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. (315 aa)
ACPL_3365Hypothetical protein; Non-ribosomal peptide synthetase modules and related proteins. (1301 aa)
ACPL_3130Acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Acetyltransferase (isoleucine patch superfamily). (199 aa)
ACPL_7742Hypothetical protein; Acetyltransferase (isoleucine patch superfamily). (174 aa)
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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