STRINGSTRING
EQB31297.1 EQB31297.1 EQB30646.1 EQB30646.1 EQB30647.1 EQB30647.1 EQB30180.1 EQB30180.1 EQB30148.1 EQB30148.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EQB31297.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (243 aa)
EQB30646.12,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (190 aa)
EQB30647.12,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
EQB30180.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
EQB30148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)
Your Current Organism:
Sphingobium ummariense
NCBI taxonomy Id: 1346791
Other names: S. ummariense RL-3, Sphingobium sp. RL-3, Sphingobium ummariense RL-3
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