STRINGSTRING
EQB34198.1 EQB34198.1 EQB33776.1 EQB33776.1 EQB33777.1 EQB33777.1 EQB33782.1 EQB33782.1 EQB33790.1 EQB33790.1 EQB33689.1 EQB33689.1 EQB33545.1 EQB33545.1 EQB33158.1 EQB33158.1 EQB33199.1 EQB33199.1 EQB32868.1 EQB32868.1 EQB32277.1 EQB32277.1 EQB32066.1 EQB32066.1 EQB31898.1 EQB31898.1 EQB31911.1 EQB31911.1 EQB31924.1 EQB31924.1 EQB31730.1 EQB31730.1 EQB31386.1 EQB31386.1 EQB31264.1 EQB31264.1 EQB30819.1 EQB30819.1 EQB30822.1 EQB30822.1 EQB30646.1 EQB30646.1 EQB30647.1 EQB30647.1 EQB30430.1 EQB30430.1 EQB30372.1 EQB30372.1 EQB30180.1 EQB30180.1 EQB30148.1 EQB30148.1 EQB30152.1 EQB30152.1 EQB29657.1 EQB29657.1 EQB29663.1 EQB29663.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EQB34198.1DltE; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (247 aa)
EQB33776.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (234 aa)
EQB33777.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (238 aa)
EQB33782.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (262 aa)
EQB33790.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)
EQB33689.13-oxoacyl-ACP synthase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
EQB33545.1SDR-family protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (261 aa)
EQB33158.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (286 aa)
EQB33199.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (356 aa)
EQB32868.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (216 aa)
EQB32277.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (241 aa)
EQB32066.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (269 aa)
EQB31898.1acetoacetyl-CoA reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (240 aa)
EQB31911.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (330 aa)
EQB31924.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)
EQB31730.1Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)
EQB31386.13-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (246 aa)
EQB31264.1Catalyzes the formation of acetoacetate from 3-hydroxybutyrate; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)
EQB30819.12-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
EQB30822.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
EQB30646.12,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (190 aa)
EQB30647.12,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)
EQB30430.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (242 aa)
EQB30372.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (272 aa)
EQB30180.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (237 aa)
EQB30148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)
EQB30152.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (269 aa)
EQB29657.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (264 aa)
EQB29663.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)
Your Current Organism:
Sphingobium ummariense
NCBI taxonomy Id: 1346791
Other names: S. ummariense RL-3, Sphingobium sp. RL-3, Sphingobium ummariense RL-3
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