STRINGSTRING
AIY64517.1 AIY64517.1 AIY64518.1 AIY64518.1 AIY64519.1 AIY64519.1 AIY64521.1 AIY64521.1 AIY64522.1 AIY64522.1 AIY64523.1 AIY64523.1 AIY64524.1 AIY64524.1 AIY64525.1 AIY64525.1 AIY64527.1 AIY64527.1 AIY64528.1 AIY64528.1 AIY64529.1 AIY64529.1 AIY64530.1 AIY64530.1 AIY64531.1 AIY64531.1 AIY64532.1 AIY64532.1 AIY64533.1 AIY64533.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIY64517.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
AIY64518.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
AIY64519.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AIY64521.1MSHA biogenesis protein MshL; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
AIY64522.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
AIY64523.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
AIY64524.1MSHA biogenesis protein MshE; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
AIY64525.1MSHA biogenesis protein MshG; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
AIY64527.1Agglutinin biogenesis protein MshB; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
AIY64528.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
AIY64529.1Agglutinin biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
AIY64530.1Agglutinin biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
AIY64531.1Agglutinin biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
AIY64532.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
AIY64533.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1348 aa)
Your Current Organism:
Pseudoalteromonas piratica
NCBI taxonomy Id: 1348114
Other names: CCOS1042, CIP 111189, P. piratica, Pseudoalteromonas piratica Beurmann et al. 2017, Pseudoalteromonas sp. OCN003, strain OCN003
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