STRINGSTRING
gap gap GCA_001591765_00776 GCA_001591765_00776 GCA_001591765_00777 GCA_001591765_00777 gpmA gpmA tpiA tpiA eno eno fba fba pfkA pfkA pyk pyk kbaY kbaY pgi pgi pgk pgk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gapUnannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
GCA_001591765_00776Unannotated protein. (482 aa)
GCA_001591765_00777Unannotated protein. (180 aa)
gpmAUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (231 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (252 aa)
enoUnannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (441 aa)
fbaUnannotated protein. (293 aa)
pfkAUnannotated protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (335 aa)
pykUnannotated protein; Belongs to the pyruvate kinase family. (500 aa)
kbaYUnannotated protein. (281 aa)
pgiUnannotated protein; Belongs to the GPI family. (448 aa)
pgkUnannotated protein; Belongs to the phosphoglycerate kinase family. (398 aa)
Your Current Organism:
Lactococcus raffinolactis NBRC100932
NCBI taxonomy Id: 1348633
Other names: L. raffinolactis NBRC 100932, Lactococcus raffinolactis NBRC 100932
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