STRINGSTRING
GCA_001591765_00166 GCA_001591765_00166 trpF trpF rpiA rpiA CMV25_04380 CMV25_04380 nagB nagB tpiA tpiA manA manA CMV25_05840 CMV25_05840 hisA hisA CMV25_06985 CMV25_06985 pgi pgi
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001591765_00166Unannotated protein. (436 aa)
trpFUnannotated protein; Belongs to the TrpF family. (205 aa)
rpiAUnannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (225 aa)
CMV25_04380Unannotated protein. (282 aa)
nagBUnannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (234 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (252 aa)
manAUnannotated protein; Belongs to the mannose-6-phosphate isomerase type 1 family. (314 aa)
CMV25_05840Unannotated protein. (215 aa)
hisAUnannotated protein. (237 aa)
CMV25_06985Unannotated protein. (152 aa)
pgiUnannotated protein; Belongs to the GPI family. (448 aa)
Your Current Organism:
Lactococcus raffinolactis NBRC100932
NCBI taxonomy Id: 1348633
Other names: L. raffinolactis NBRC 100932, Lactococcus raffinolactis NBRC 100932
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