STRINGSTRING
GJA_103 GJA_103 GJA_104 GJA_104 GJA_105 GJA_105 GJA_5124 GJA_5124 GJA_5125 GJA_5125 GJA_5126 GJA_5126
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GJA_103Periplasmic binding s and sugar binding domain of the LacI family protein. (313 aa)
GJA_104ABC transporter family protein. (531 aa)
GJA_105Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
GJA_5124Periplasmic binding s and sugar binding domain of the LacI family protein. (321 aa)
GJA_5125Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
GJA_5126ABC transporter family protein. (495 aa)
Your Current Organism:
Janthinobacterium agaricidamnosum
NCBI taxonomy Id: 1349767
Other names: J. agaricidamnosum NBRC 102515 = DSM 9628, Janthinobacterium agaricidamnosum DSM 9628, Janthinobacterium agaricidamnosum DSM 9628 = NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
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