(18 nodes) Branched-chain amino acid transport, and Leucine-binding protein domain network (Janthinobacterium agaricidamnosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GJA_1092	Receptor ligand binding region family protein. (378 aa)
	GJA_1093	Receptor ligand binding region family protein. (378 aa)
	GJA_1094	Receptor ligand binding region family protein. (378 aa)
	GJA_1145	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
	GJA_1146	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (389 aa)
	GJA_1147	ABC transporter family protein. (256 aa)
	GJA_1148	Branched chain amino acid ABC transporter, ATP-binding protein. (240 aa)
	GJA_5220	AMP-binding enzyme family protein. (644 aa)
	GJA_5221	ABC transporter family protein. (262 aa)
	GJA_5222	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (300 aa)
	GJA_5223	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (352 aa)
	livK	Branched-chain amino acid transport system substrate-binding protein. (439 aa)
	GJA_5225	ABC transporter family protein. (272 aa)
	GJA_5270	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
	GJA_5271	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. (294 aa)
	GJA_5272	Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein. (402 aa)
	GJA_5273	ABC transporter family protein. (235 aa)
	GJA_5274	ABC transporter family protein. (256 aa)

Your Current Organism:

Janthinobacterium agaricidamnosum

NCBI taxonomy Id: 1349767
Other names: J. agaricidamnosum NBRC 102515 = DSM 9628, Janthinobacterium agaricidamnosum DSM 9628, Janthinobacterium agaricidamnosum DSM 9628 = NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GJA_1092	GJA_1093	GJA_1092	GJA_1093	Receptor ligand binding region family protein.	Receptor ligand binding region family protein.	0.939
GJA_1092	GJA_1094	GJA_1092	GJA_1094	Receptor ligand binding region family protein.	Receptor ligand binding region family protein.	0.924
GJA_1092	GJA_1145	GJA_1092	GJA_1145	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.907
GJA_1092	GJA_1146	GJA_1092	GJA_1146	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.947
GJA_1092	GJA_1147	GJA_1092	GJA_1147	Receptor ligand binding region family protein.	ABC transporter family protein.	0.901
GJA_1092	GJA_1148	GJA_1092	GJA_1148	Receptor ligand binding region family protein.	Branched chain amino acid ABC transporter, ATP-binding protein.	0.851
GJA_1092	GJA_5221	GJA_1092	GJA_5221	Receptor ligand binding region family protein.	ABC transporter family protein.	0.877
GJA_1092	GJA_5222	GJA_1092	GJA_5222	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.883
GJA_1092	GJA_5223	GJA_1092	GJA_5223	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.920
GJA_1092	GJA_5225	GJA_1092	GJA_5225	Receptor ligand binding region family protein.	ABC transporter family protein.	0.812
GJA_1092	GJA_5270	GJA_1092	GJA_5270	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.864
GJA_1092	GJA_5271	GJA_1092	GJA_5271	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.886
GJA_1092	GJA_5272	GJA_1092	GJA_5272	Receptor ligand binding region family protein.	Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein.	0.911
GJA_1092	GJA_5273	GJA_1092	GJA_5273	Receptor ligand binding region family protein.	ABC transporter family protein.	0.779
GJA_1092	GJA_5274	GJA_1092	GJA_5274	Receptor ligand binding region family protein.	ABC transporter family protein.	0.835
GJA_1092	livK	GJA_1092	GJA_5224	Receptor ligand binding region family protein.	Branched-chain amino acid transport system substrate-binding protein.	0.900
GJA_1093	GJA_1092	GJA_1093	GJA_1092	Receptor ligand binding region family protein.	Receptor ligand binding region family protein.	0.939
GJA_1093	GJA_1094	GJA_1093	GJA_1094	Receptor ligand binding region family protein.	Receptor ligand binding region family protein.	0.942
GJA_1093	GJA_1145	GJA_1093	GJA_1145	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.907
GJA_1093	GJA_1146	GJA_1093	GJA_1146	Receptor ligand binding region family protein.	Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family.	0.947

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