(29 nodes) Efflux transmembrane transporter activity network (Janthinobacterium agaricidamnosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GJA_851	Outer membrane efflux family protein. (435 aa)
	GJA_1023	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (467 aa)
	GJA_1029	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (471 aa)
	GJA_1108	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (494 aa)
	oprM	Outer membrane protein oprM. (459 aa)
	GJA_147	C4-dicarboxylate transporter/malic acid transport family protein. (329 aa)
	rhtA	Inner membrane transporter rhtA. (273 aa)
	GJA_181	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (460 aa)
	GJA_2334	Conserved hypothetical protein. (348 aa)
	silC	silC, OMP component, silver resistance, three components proton antiporter efflux system. (462 aa)
	GJA_2577	Outer membrane efflux family protein. (429 aa)
	GJA_2910	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (497 aa)
	GJA_2934	Outer membrane efflux family protein. (453 aa)
	GJA_3118	Outer membrane efflux family protein. (419 aa)
	GJA_3169	Outer membrane efflux family protein. (460 aa)
	GJA_3191	Outer membrane efflux family protein. (452 aa)
	GJA_3297	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (469 aa)
	oprM-2	Outer membrane protein oprM. (497 aa)
	oprM-3	Outer membrane protein oprM. (486 aa)
	GJA_3570	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (491 aa)
	GJA_3731	Conserved hypothetical protein. (369 aa)
	GJA_3767	Conserved hypothetical protein. (360 aa)
	GJA_4049	Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein. (469 aa)
	GJA_4518	Conserved hypothetical protein. (348 aa)
	GJA_459	Type I secretion outer membrane, TolC family protein. (438 aa)
	czcC	Cobalt-zinc-cadmium resistance protein CzcC. (407 aa)
	GJA_502	Conserved hypothetical protein. (363 aa)
	oprM-4	Outer membrane protein oprM. (473 aa)
	GJA_740	C4-dicarboxylate transporter/malic acid transport family protein. (332 aa)

Your Current Organism:

Janthinobacterium agaricidamnosum

NCBI taxonomy Id: 1349767
Other names: J. agaricidamnosum NBRC 102515 = DSM 9628, Janthinobacterium agaricidamnosum DSM 9628, Janthinobacterium agaricidamnosum DSM 9628 = NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GJA_2577	silC	GJA_2577	GJA_2461	Outer membrane efflux family protein.	silC, OMP component, silver resistance, three components proton antiporter efflux system.	0.601
GJA_851	silC	GJA_851	GJA_2461	Outer membrane efflux family protein.	silC, OMP component, silver resistance, three components proton antiporter efflux system.	0.554
czcC	silC	GJA_4766	GJA_2461	Cobalt-zinc-cadmium resistance protein CzcC.	silC, OMP component, silver resistance, three components proton antiporter efflux system.	0.729
silC	GJA_2577	GJA_2461	GJA_2577	silC, OMP component, silver resistance, three components proton antiporter efflux system.	Outer membrane efflux family protein.	0.601
silC	GJA_851	GJA_2461	GJA_851	silC, OMP component, silver resistance, three components proton antiporter efflux system.	Outer membrane efflux family protein.	0.554
silC	czcC	GJA_2461	GJA_4766	silC, OMP component, silver resistance, three components proton antiporter efflux system.	Cobalt-zinc-cadmium resistance protein CzcC.	0.729

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