STRINGSTRING
czcA-2 czcA-2 GJA_1027 GJA_1027 GJA_1280 GJA_1280 GJA_180 GJA_180 GJA_2384 GJA_2384 czcA czcA GJA_2911 GJA_2911 mdtC mdtC GJA_3299 GJA_3299 mexB mexB acrB acrB GJA_3863 GJA_3863 czcA-3 czcA-3 GJA_4915 GJA_4915 GJA_5402 GJA_5402 czcA-4 czcA-4 GJA_859 GJA_859
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
czcA-2Heavy metal efflux pump, CzcA family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1029 aa)
GJA_1027acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)
GJA_1280RND transporter, hydrophobe/amphiphile efflux-1 family protein. (1058 aa)
GJA_180acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1028 aa)
GJA_2384acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1030 aa)
czcAHeavy metal efflux pump, CzcA family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1049 aa)
GJA_2911RND transporter, hydrophobe/amphiphile efflux-1 family protein. (1060 aa)
mdtCMultidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1069 aa)
GJA_3299acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1037 aa)
mexBMultidrug resistance protein MexB. (1050 aa)
acrBAcriflavine resistance protein B. (1054 aa)
GJA_3863acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1075 aa)
czcA-3Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1047 aa)
GJA_4915acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1028 aa)
GJA_5402RND transporter, hydrophobe/amphiphile efflux-1 family protein. (1064 aa)
czcA-4Heavy metal efflux pump, CzcA family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1034 aa)
GJA_859acrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1044 aa)
Your Current Organism:
Janthinobacterium agaricidamnosum
NCBI taxonomy Id: 1349767
Other names: J. agaricidamnosum NBRC 102515 = DSM 9628, Janthinobacterium agaricidamnosum DSM 9628, Janthinobacterium agaricidamnosum DSM 9628 = NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
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