STRINGSTRING
SLK22624.1 SLK22624.1 SLK22978.1 SLK22978.1 tRNA-Gly-1_1 tRNA-Gly-1_1 SLK10596.1 SLK10596.1 SLK10776.1 SLK10776.1 SLK10873.1 SLK10873.1 SLK10925.1 SLK10925.1 SLK11486.1 SLK11486.1 SLK11617.1 SLK11617.1 SLK12017.1 SLK12017.1 SLK12413.1 SLK12413.1 SLK12510.1 SLK12510.1 SLK12560.1 SLK12560.1 SLK12595.1 SLK12595.1 SLK12692.1 SLK12692.1 SLK12926.1 SLK12926.1 SLK13511.1 SLK13511.1 SLK13516.1 SLK13516.1 SLK13686.1 SLK13686.1 SLK13755.1 SLK13755.1 SLK22982.1 SLK22982.1 SLK14266.1 SLK14266.1 SLK14273.1 SLK14273.1 SLK14337.1 SLK14337.1 SLK14352.1 SLK14352.1 SLK14452.1 SLK14452.1 SLK14795.1 SLK14795.1 SLK14875.1 SLK14875.1 SLK14896.1 SLK14896.1 SLK15179.1 SLK15179.1 SLK15659.1 SLK15659.1 SLK23002.1 SLK23002.1 hrcA hrcA SLK15865.1 SLK15865.1 sigA sigA birA birA SLK16155.1 SLK16155.1 SLK16187.1 SLK16187.1 SLK16354.1 SLK16354.1 SLK16398.1 SLK16398.1 SLK16413.1 SLK16413.1 SLK16638.1 SLK16638.1 SLK16660.1 SLK16660.1 SLK16846.1 SLK16846.1 SLK16918.1 SLK16918.1 SLK16972.1 SLK16972.1 SLK17021.1 SLK17021.1 SLK17040.1 SLK17040.1 SLK17060.1 SLK17060.1 SLK17277.1 SLK17277.1 codY codY SLK17500.1 SLK17500.1 SLK17811.1 SLK17811.1 SLK17856.1 SLK17856.1 SLK22983.1 SLK22983.1 lexA lexA SLK18101.1 SLK18101.1 SLK18343.1 SLK18343.1 SLK18351.1 SLK18351.1 scpB scpB SLK18455.1 SLK18455.1 SLK18482.1 SLK18482.1 argR argR SLK19134.1 SLK19134.1 recX recX SLK19224.1 SLK19224.1 SLK19375.1 SLK19375.1 ruvB ruvB SLK19513.1 SLK19513.1 SLK19949.1 SLK19949.1 SLK20184.1 SLK20184.1 SLK20392.1 SLK20392.1 SLK20410.1 SLK20410.1 SLK20506.1 SLK20506.1 SLK20629.1 SLK20629.1 SLK20654.1 SLK20654.1 SLK20788.1 SLK20788.1 SLK20909.1 SLK20909.1 SLK20997.1 SLK20997.1 SLK21200.1 SLK21200.1 SLK21250.1 SLK21250.1 SLK21418.1 SLK21418.1 SLK21540.1 SLK21540.1 SLK21658.1 SLK21658.1 SLK21698.1 SLK21698.1 SLK21751.1 SLK21751.1 SLK22349.1 SLK22349.1 SLK22445.1 SLK22445.1 rex rex SLK22503.1 SLK22503.1 SLK22614.1 SLK22614.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SLK22624.1Putative ROK family protein. (397 aa)
SLK22978.1Putative Methylated-DNA--protein-cysteine methyltransferase. (165 aa)
tRNA-Gly-1_1Putative Transcriptional regulator, biotin repressor family. (168 aa)
SLK10596.1Putative Transcriptional regulator. (138 aa)
SLK10776.1Putative Transcriptional regulator, PadR family. (151 aa)
SLK10873.1Putative Purine operon repressor, PurR. (271 aa)
SLK10925.1Putative Transcriptional regulatory protein. (230 aa)
SLK11486.1Putative Transcriptional regulator, GntR family. (240 aa)
SLK11617.1RNA polymerase factor sigma-70. (214 aa)
SLK12017.1Putative Two component transcriptional regulator,winged helix family. (231 aa)
SLK12413.1Putative Transcriptional regulator, ArsR family/dinitrogenase iron-molybdenum cofactor family protein. (127 aa)
SLK12510.1Putative Transcriptional regulator, RpiR family. (278 aa)
SLK12560.1Hypothetical protein. (124 aa)
SLK12595.1Putative FCD domain protein. (229 aa)
SLK12692.1Putative RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
SLK12926.1Putative Transcriptional regulator, DeoR family. (263 aa)
SLK13511.1Putative PTS modulated transcriptional regulator,MtlR family. (710 aa)
SLK13516.1Putative Primosome, DnaD subunit. (90 aa)
SLK13686.1Putative Two component transcriptional regulator,winged helix family. (224 aa)
SLK13755.1Putative Transcriptional regulator, PadR-like protein family. (111 aa)
SLK22982.1Rrf2 family protein, putative transcriptional regulator. (69 aa)
SLK14266.1Putative Transcriptional regulator, ArsR family. (92 aa)
SLK14273.1Putative Two component transcriptional regulator,winged helix family. (232 aa)
SLK14337.1Putative Phosphosugar-binding transcriptional regulator, RpiR family. (267 aa)
SLK14352.1Putative SIS domain protein. (282 aa)
SLK14452.1Putative Transcriptional regulator, GntR family. (124 aa)
SLK14795.1Putative cAMP-binding protein. (229 aa)
SLK14875.1Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (304 aa)
SLK14896.1Putative Transcriptional regulator PadR family protein. (121 aa)
SLK15179.1Putative Transcriptional regulator, Fur family; Belongs to the Fur family. (135 aa)
SLK15659.1Putative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (251 aa)
SLK23002.1Transcriptional regulator. (74 aa)
hrcAPutative Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (343 aa)
SLK15865.1Putative CBS domain protein. (212 aa)
sigAPutative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (369 aa)
birAPutative Biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (326 aa)
SLK16155.1Putative Transcriptional regulator, AsnC family. (155 aa)
SLK16187.1Putative S1 RNA binding domain protein; Belongs to the CvfB family. (280 aa)
SLK16354.1Putative Transcriptional regulator, LuxR family. (256 aa)
SLK16398.1Putative Two component transcriptional regulator,winged helix family. (220 aa)
SLK16413.1Putative transcriptional regulator. (66 aa)
SLK16638.1Hypothetical protein. (86 aa)
SLK16660.1Putative DNA-binding protein YwzG. (50 aa)
SLK16846.1Putative MarR-family transcriptional regulator. (150 aa)
SLK16918.1Putative Rrf2 family protein. (150 aa)
SLK16972.1Putative transcription regulator; Belongs to the Fur family. (152 aa)
SLK17021.1Putative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (231 aa)
SLK17040.1Putative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (235 aa)
SLK17060.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP; Putative Response regulator (CheY-like receiver and winged helix DNA-binding domain containing protein). (232 aa)
SLK17277.1Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. (109 aa)
codYPutative GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (258 aa)
SLK17500.1Putative stage III sporulation protein E. (806 aa)
SLK17811.1Putative transcriptional regulator. (160 aa)
SLK17856.1Putative Transcriptional regulator, DeoR family. (254 aa)
SLK22983.1Rrf2 family protein, putative transcriptional regulator. (59 aa)
lexAPutative LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (204 aa)
SLK18101.1Putative Transcriptional regulator. (298 aa)
SLK18343.1PadR family transcriptional regulator. (129 aa)
SLK18351.1Putative Transcriptional regulator, GntR family. (127 aa)
scpBPutative Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (203 aa)
SLK18455.1Hypothetical protein. (246 aa)
SLK18482.1Putative Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (268 aa)
argRPutative Arginine repressor; Regulates arginine biosynthesis genes. (149 aa)
SLK19134.1Hypothetical protein. (177 aa)
recXPutative Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. (212 aa)
SLK19224.1Putative Two component transcriptional regulator,winged helix family. (225 aa)
SLK19375.1Putative ATP-dependent DNA helicase RecQ. (811 aa)
ruvBPutative Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (342 aa)
SLK19513.1Putative Transcriptional regulator, GntR family/aminotransferase. (467 aa)
SLK19949.1Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)
SLK20184.1Potassium transporter TrkA. (209 aa)
SLK20392.1Putative Transcriptional regulator, MarR family. (147 aa)
SLK20410.1Putative Transcriptional regulator, DeoR family. (253 aa)
SLK20506.1Putative Transcriptional regulator, GntR family with aminotransferase domain. (466 aa)
SLK20629.1Putative RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. (185 aa)
SLK20654.1Putative Transcriptional regulator, GntR family. (246 aa)
SLK20788.1Putative Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)
SLK20909.1Putative Transcriptional regulator, Fur family; Belongs to the Fur family. (135 aa)
SLK20997.1Putative Transcriptional regulator, GntR family. (124 aa)
SLK21200.1Putative Transcriptional regulator, GntR family. (133 aa)
SLK21250.1Putative RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
SLK21418.1Putative MarR-family transcriptional regulator. (149 aa)
SLK21540.1Putative HTH-type transcriptional repressor NsrR. (131 aa)
SLK21658.1Putative Transcriptional regulator. (390 aa)
SLK21698.1Putative Regulatory protein VanR. (238 aa)
SLK21751.1Putative ATP-dependent DNA helicase RecQ. (587 aa)
SLK22349.1Putative Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. (226 aa)
SLK22445.1Putative Transcriptional regulator, GntR family. (242 aa)
rexPutative Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (223 aa)
SLK22503.1Putative Cadmium efflux system accessory protein. (119 aa)
SLK22614.1Putative DNA-binding response regulator. (225 aa)
Your Current Organism:
Clostridium chauvoei
NCBI taxonomy Id: 1351755
Other names: C. chauvoei JF4335, Clostridium chauvoei JF4335
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