STRINGSTRING
dnaA dnaA SLK10397.1 SLK10397.1 SLK10399.1 SLK10399.1 SLK10437.1 SLK10437.1 SLK10947.1 SLK10947.1 SLK12472.1 SLK12472.1 SLK12677.1 SLK12677.1 SLK12684.1 SLK12684.1 SLK12885.1 SLK12885.1 SLK13177.1 SLK13177.1 SLK13288.1 SLK13288.1 SLK13363.1 SLK13363.1 mprF mprF SLK13887.1 SLK13887.1 SLK14495.1 SLK14495.1 SLK14710.1 SLK14710.1 SLK14714.1 SLK14714.1 SLK14795.1 SLK14795.1 SLK15321.1 SLK15321.1 SLK15346.1 SLK15346.1 SLK15351.1 SLK15351.1 SLK15352.1 SLK15352.1 SLK15361.1 SLK15361.1 SLK15365.1 SLK15365.1 SLK15376.1 SLK15376.1 csrA csrA SLK15427.1 SLK15427.1 SLK15430.1 SLK15430.1 SLK15433.1 SLK15433.1 SLK15441.1 SLK15441.1 SLK15488.1 SLK15488.1 SLK15531.1 SLK15531.1 SLK16392.1 SLK16392.1 SLK16753.1 SLK16753.1 SLK17060.1 SLK17060.1 SLK17062.1 SLK17062.1 SLK17064.1 SLK17064.1 SLK17594.1 SLK17594.1 SLK18482.1 SLK18482.1 SLK18789.1 SLK18789.1 SLK18885.1 SLK18885.1 SLK19227.1 SLK19227.1 SLK19317.1 SLK19317.1 glsA glsA SLK20258.1 SLK20258.1 SLK20327.1 SLK20327.1 SLK20329.1 SLK20329.1 SLK20773.1 SLK20773.1 SLK20774.1 SLK20774.1 SLK21132.1 SLK21132.1 SLK21661.1 SLK21661.1 SLK21698.1 SLK21698.1 SLK21782.1 SLK21782.1 SLK22239.1 SLK22239.1 SLK22240.1 SLK22240.1 SLK22312.1 SLK22312.1 SLK22349.1 SLK22349.1 SLK22426.1 SLK22426.1 SLK22590.1 SLK22590.1 SLK22692.1 SLK22692.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaAPutative Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (452 aa)
SLK10397.1Hypothetical protein. (395 aa)
SLK10399.1Putative Na+ ABC transporter (ATP-binding protein), NATA. (243 aa)
SLK10437.1Putative GlnA; Belongs to the glutamine synthetase family. (631 aa)
SLK10947.1Putative PDZ domain protein. (375 aa)
SLK12472.1Putative methyl-accepting transducer. (450 aa)
SLK12677.1Putative Two-component sensor histidine kinase. (591 aa)
SLK12684.1Putative Response regulator receiver domain protein. (504 aa)
SLK12885.1Hypothetical protein. (599 aa)
SLK13177.1Putative Capsular polysaccharide biosynthesis protein. (257 aa)
SLK13288.1Putative UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (370 aa)
SLK13363.1Putative Capsular polysaccharide biosynthesis protein. (258 aa)
mprFPutative Oxacillin resistance-related FmtC protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. (844 aa)
SLK13887.1Putative Two-component response regulator. (232 aa)
SLK14495.1Putative Two component transcriptional regulator,AraC family. (359 aa)
SLK14710.1Putative Histidine kinase. (580 aa)
SLK14714.1Putative AraC family DNA-binding response regulator. (493 aa)
SLK14795.1Putative cAMP-binding protein. (229 aa)
SLK15321.1Putative Chemotaxis protein. (151 aa)
SLK15346.1Putative Chemotaxis response regulator protein-glutamate methylesterase. (195 aa)
SLK15351.1Putative Methylase of chemotaxis methyl-accepting protein. (255 aa)
SLK15352.1Putative Chemotaxis protein CheA. (669 aa)
SLK15361.1Putative Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY. (119 aa)
SLK15365.1Putative Chemotaxis signal transduction protein CheW. (131 aa)
SLK15376.1Putative Negative regulator of flagellin synthesis FlgM. (90 aa)
csrAHypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (71 aa)
SLK15427.1Putative Flagellin protein FliB; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (413 aa)
SLK15430.1Putative Flagellin protein FliB; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (413 aa)
SLK15433.1Putative Flagellin protein FliB; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (413 aa)
SLK15441.1Putative Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (286 aa)
SLK15488.1Putative Chemotaxis protein MotA. (268 aa)
SLK15531.1Putative RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (241 aa)
SLK16392.1Hypothetical protein. (471 aa)
SLK16753.1Putative Methyl-accepting chemotaxis protein. (677 aa)
SLK17060.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP; Putative Response regulator (CheY-like receiver and winged helix DNA-binding domain containing protein). (232 aa)
SLK17062.1Putative Sensor histidine kinase. (562 aa)
SLK17064.1Hypothetical protein. (277 aa)
SLK17594.1Putative Chemotaxis sensory transducer. (494 aa)
SLK18482.1Putative Response regulator receiver protein; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (268 aa)
SLK18789.1Putative signal transduction protein. (603 aa)
SLK18885.1Putative Serine-type D-Ala-D-Ala carboxypeptidase (fragment). (392 aa)
SLK19227.1Putative Two-component sensor histidine kinase. (505 aa)
SLK19317.1Putative Methyl-accepting chemotaxis sensory transducer. (489 aa)
glsAPutative Glutaminase 2; Belongs to the glutaminase family. (305 aa)
SLK20258.1Putative Methyl-accepting chemotaxis protein. (686 aa)
SLK20327.1Putative Two-component response regulator. (165 aa)
SLK20329.1Putative Two-component sensor histidine kinase. (390 aa)
SLK20773.1Putative AgrD1. (44 aa)
SLK20774.1Putative accessory gene regulator protein B. (212 aa)
SLK21132.1Putative Membrane assosiated methyl-accepting chemotaxis protein with HAMP domain protein. (570 aa)
SLK21661.1Putative RNA polymerase sigma factor sigma54. (458 aa)
SLK21698.1Putative Regulatory protein VanR. (238 aa)
SLK21782.1Putative Methyl-accepting chemotaxis protein. (668 aa)
SLK22239.1Putative Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
SLK22240.1Putative UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (383 aa)
SLK22312.1Putative Peptidase, S1B family. (420 aa)
SLK22349.1Putative Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. (226 aa)
SLK22426.1Putative Type II secretory pathway pseudopilin PulG-like protein. (137 aa)
SLK22590.1Hypothetical protein. (330 aa)
SLK22692.1Putative two-component response regulator. (300 aa)
Your Current Organism:
Clostridium chauvoei
NCBI taxonomy Id: 1351755
Other names: C. chauvoei JF4335, Clostridium chauvoei JF4335
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