STRINGSTRING
A0A165CLR9 A0A165CLR9 A0A165DJZ4 A0A165DJZ4 A0A165DPL6 A0A165DPL6 A0A165E1Z7 A0A165E1Z7 A0A165E257 A0A165E257 A0A165EUX5 A0A165EUX5 A0A165EVA4 A0A165EVA4 A0A165F0E4 A0A165F0E4 NOP7 NOP7 A0A165FD56 A0A165FD56 A0A165FDY4 A0A165FDY4 A0A165FHA6 A0A165FHA6 A0A165G935 A0A165G935 ERB1 ERB1 A0A165IED9 A0A165IED9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A165CLR9Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (246 aa)
A0A165DJZ4RNA helicase. (559 aa)
A0A165DPL6RRM domain-containing protein. (244 aa)
A0A165E1Z7Ribosomal protein L1. (459 aa)
A0A165E257Eukaryotic rRNA processing. (367 aa)
A0A165EUX5Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (680 aa)
A0A165EVA4P-loop containing nucleoside triphosphate hydrolase protein. (490 aa)
A0A165F0E460S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (635 aa)
A0A165FD56Ribosomal protein S8e. (262 aa)
A0A165FDY4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (667 aa)
A0A165FHA6TRASH domain-containing protein. (194 aa)
A0A165G935Ribosome biogenesis protein BRX1. (298 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (759 aa)
A0A165IED9NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (534 aa)
Your Current Organism:
Calocera cornea
NCBI taxonomy Id: 1353952
Other names: C. cornea HHB12733, Calocera cornea HHB12733
Server load: low (18%) [HD]