(23 nodes) Mixed, incl. Protein desumoylation, and Cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) network (Calocera cornea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165C0S8	Cysteine proteinase. (269 aa)
	A0A165CF11	Cysteine proteinase. (274 aa)
	A0A165D6L0	ULP_PROTEASE domain-containing protein. (1023 aa)
	A0A165DF58	Uncharacterized protein. (295 aa)
	A0A165DR69	CLP1_P domain-containing protein. (592 aa)
	A0A165E3D1	ULP_PROTEASE domain-containing protein. (769 aa)
	A0A165E547	Uncharacterized protein. (506 aa)
	A0A165ERZ4	Uncharacterized protein. (546 aa)
	A0A165ESE2	Uncharacterized protein. (243 aa)
	A0A165ETG8	Uncharacterized protein. (214 aa)
	A0A165F230	Uncharacterized protein. (612 aa)
	A0A165FC18	Uncharacterized protein. (1151 aa)
	A0A165FEY0	Uncharacterized protein. (332 aa)
	A0A165FF27	WW domain-containing protein. (154 aa)
	A0A165FF38	Rho GTPase activation protein. (502 aa)
	A0A165FRS9	Uncharacterized protein. (137 aa)
	A0A165GGZ0	Cysteine proteinase. (679 aa)
	A0A165GHN0	Las1-domain-containing protein. (236 aa)
	A0A165H235	Uncharacterized protein. (322 aa)
	A0A165HPU6	CUE domain-containing protein. (1070 aa)
	A0A165J027	CxC1 domain-containing protein. (1824 aa)
	A0A165JBT8	Uncharacterized protein. (580 aa)
	A0A166JF16	Cysteine proteinase. (155 aa)

Your Current Organism:

Calocera cornea

NCBI taxonomy Id: 1353952
Other names: C. cornea HHB12733, Calocera cornea HHB12733

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165C0S8	A0A165DR69	Cysteine proteinase.	CLP1_P domain-containing protein.	0.673
A0A165C0S8	A0A165FF27	Cysteine proteinase.	WW domain-containing protein.	0.596
A0A165C0S8	A0A165FF38	Cysteine proteinase.	Rho GTPase activation protein.	0.596
A0A165C0S8	A0A165GHN0	Cysteine proteinase.	Las1-domain-containing protein.	0.733
A0A165CF11	A0A165DR69	Cysteine proteinase.	CLP1_P domain-containing protein.	0.673
A0A165CF11	A0A165FF27	Cysteine proteinase.	WW domain-containing protein.	0.596
A0A165CF11	A0A165FF38	Cysteine proteinase.	Rho GTPase activation protein.	0.596
A0A165CF11	A0A165GHN0	Cysteine proteinase.	Las1-domain-containing protein.	0.733
A0A165D6L0	A0A165DR69	ULP_PROTEASE domain-containing protein.	CLP1_P domain-containing protein.	0.623
A0A165D6L0	A0A165GHN0	ULP_PROTEASE domain-containing protein.	Las1-domain-containing protein.	0.691
A0A165DF58	A0A165DR69	Uncharacterized protein.	CLP1_P domain-containing protein.	0.653
A0A165DF58	A0A165GHN0	Uncharacterized protein.	Las1-domain-containing protein.	0.631
A0A165DR69	A0A165C0S8	CLP1_P domain-containing protein.	Cysteine proteinase.	0.673
A0A165DR69	A0A165CF11	CLP1_P domain-containing protein.	Cysteine proteinase.	0.673
A0A165DR69	A0A165D6L0	CLP1_P domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.623
A0A165DR69	A0A165DF58	CLP1_P domain-containing protein.	Uncharacterized protein.	0.653
A0A165DR69	A0A165E3D1	CLP1_P domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.623
A0A165DR69	A0A165E547	CLP1_P domain-containing protein.	Uncharacterized protein.	0.549
A0A165DR69	A0A165ERZ4	CLP1_P domain-containing protein.	Uncharacterized protein.	0.653
A0A165DR69	A0A165ESE2	CLP1_P domain-containing protein.	Uncharacterized protein.	0.623