(12 nodes) Mixed, incl. Protein desumoylation, and Cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) network (Calocera cornea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165C0S8	Cysteine proteinase. (269 aa)
	A0A165CF11	Cysteine proteinase. (274 aa)
	A0A165DR69	CLP1_P domain-containing protein. (592 aa)
	A0A165ERZ4	Uncharacterized protein. (546 aa)
	A0A165ESE2	Uncharacterized protein. (243 aa)
	A0A165F230	Uncharacterized protein. (612 aa)
	A0A165FEY0	Uncharacterized protein. (332 aa)
	A0A165FF27	WW domain-containing protein. (154 aa)
	A0A165FF38	Rho GTPase activation protein. (502 aa)
	A0A165FRS9	Uncharacterized protein. (137 aa)
	A0A165GHN0	Las1-domain-containing protein. (236 aa)
	A0A165H235	Uncharacterized protein. (322 aa)

Your Current Organism:

Calocera cornea

NCBI taxonomy Id: 1353952
Other names: C. cornea HHB12733, Calocera cornea HHB12733

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165C0S8	A0A165DR69	Cysteine proteinase.	CLP1_P domain-containing protein.	0.673
A0A165C0S8	A0A165FF27	Cysteine proteinase.	WW domain-containing protein.	0.596
A0A165C0S8	A0A165FF38	Cysteine proteinase.	Rho GTPase activation protein.	0.596
A0A165C0S8	A0A165GHN0	Cysteine proteinase.	Las1-domain-containing protein.	0.733
A0A165CF11	A0A165DR69	Cysteine proteinase.	CLP1_P domain-containing protein.	0.673
A0A165CF11	A0A165FF27	Cysteine proteinase.	WW domain-containing protein.	0.596
A0A165CF11	A0A165FF38	Cysteine proteinase.	Rho GTPase activation protein.	0.596
A0A165CF11	A0A165GHN0	Cysteine proteinase.	Las1-domain-containing protein.	0.733
A0A165DR69	A0A165C0S8	CLP1_P domain-containing protein.	Cysteine proteinase.	0.673
A0A165DR69	A0A165CF11	CLP1_P domain-containing protein.	Cysteine proteinase.	0.673
A0A165DR69	A0A165ERZ4	CLP1_P domain-containing protein.	Uncharacterized protein.	0.653
A0A165DR69	A0A165ESE2	CLP1_P domain-containing protein.	Uncharacterized protein.	0.623
A0A165DR69	A0A165F230	CLP1_P domain-containing protein.	Uncharacterized protein.	0.653
A0A165DR69	A0A165FEY0	CLP1_P domain-containing protein.	Uncharacterized protein.	0.623
A0A165DR69	A0A165FF27	CLP1_P domain-containing protein.	WW domain-containing protein.	0.549
A0A165DR69	A0A165FF38	CLP1_P domain-containing protein.	Rho GTPase activation protein.	0.549
A0A165DR69	A0A165FRS9	CLP1_P domain-containing protein.	Uncharacterized protein.	0.653
A0A165DR69	A0A165GHN0	CLP1_P domain-containing protein.	Las1-domain-containing protein.	0.999
A0A165DR69	A0A165H235	CLP1_P domain-containing protein.	Uncharacterized protein.	0.623
A0A165ERZ4	A0A165DR69	Uncharacterized protein.	CLP1_P domain-containing protein.	0.653