STRINGSTRING
Cbn-puf-9 Cbn-puf-9 CAEBREN_19977 CAEBREN_19977 CAEBREN_06588 CAEBREN_06588 CAEBREN_05352 CAEBREN_05352 CAEBREN_18183 CAEBREN_18183 CAEBREN_02701 CAEBREN_02701 CAEBREN_25845 CAEBREN_25845 Cbn-pab-2 Cbn-pab-2 CAEBREN_06394 CAEBREN_06394 CAEBREN_06480 CAEBREN_06480 CAEBREN_02810 CAEBREN_02810 Cbn-pqn-45 Cbn-pqn-45 CAEBREN_10519 CAEBREN_10519 CAEBREN_02448 CAEBREN_02448 CAEBREN_01277 CAEBREN_01277 CAEBREN_19695 CAEBREN_19695 CAEBREN_00053 CAEBREN_00053 CAEBREN_18124 CAEBREN_18124 Cbn-cgh-1 Cbn-cgh-1 CAEBREN_18620 CAEBREN_18620 CAEBREN_21321 CAEBREN_21321 CAEBREN_01839 CAEBREN_01839 CAEBREN_23525 CAEBREN_23525 Cbn-cpb-1 Cbn-cpb-1 CAEBREN_06531 CAEBREN_06531 CAEBREN_17385 CAEBREN_17385 CAEBREN_13034 CAEBREN_13034 CAEBREN_29536 CAEBREN_29536 Cbn-cey-4 Cbn-cey-4 CAEBREN_14700 CAEBREN_14700 CAEBREN_15921 CAEBREN_15921 CAEBREN_24563 CAEBREN_24563 CAEBREN_08045 CAEBREN_08045 Cbn-dcap-1 Cbn-dcap-1 CAEBREN_02711 CAEBREN_02711 CAEBREN_19781 CAEBREN_19781 CAEBREN_10092 CAEBREN_10092 CAEBREN_19476 CAEBREN_19476 CAEBREN_00916 CAEBREN_00916 CAEBREN_11725 CAEBREN_11725 CAEBREN_24382 CAEBREN_24382 CAEBREN_00444 CAEBREN_00444 CAEBREN_14163 CAEBREN_14163 CAEBREN_24618 CAEBREN_24618 CAEBREN_15455 CAEBREN_15455 CAEBREN_18035 CAEBREN_18035 CAEBREN_20533 CAEBREN_20533 CAEBREN_25139 CAEBREN_25139 CAEBREN_00470 CAEBREN_00470 Cbn-lsm-1 Cbn-lsm-1 LSM5 LSM5 CAEBREN_24701 CAEBREN_24701 CAEBREN_06559 CAEBREN_06559 CAEBREN_10930 CAEBREN_10930 CAEBREN_23663 CAEBREN_23663 Cbn-xrn-1 Cbn-xrn-1 CAEBREN_24130 CAEBREN_24130 CAEBREN_14362 CAEBREN_14362 CAEBREN_07483 CAEBREN_07483 CAEBREN_08752 CAEBREN_08752 CAEBREN_32378 CAEBREN_32378 CAEBREN_08981 CAEBREN_08981 CAEBREN_17063 CAEBREN_17063 Cbn-ifg-1 Cbn-ifg-1 Cbn-pup-3 Cbn-pup-3 CAEBREN_17557 CAEBREN_17557 CAEBREN_07343 CAEBREN_07343 CAEBREN_29447 CAEBREN_29447 Cbn-ife-4 Cbn-ife-4 CAEBREN_17593 CAEBREN_17593 CAEBREN_10094 CAEBREN_10094 Cbn-lsm-4 Cbn-lsm-4 Cbn-puf-8 Cbn-puf-8 CAEBREN_13282 CAEBREN_13282 CAEBREN_32524 CAEBREN_32524 CAEBREN_32839 CAEBREN_32839 CAEBREN_19142 CAEBREN_19142 Cbn-gld-3 Cbn-gld-3 CAEBREN_19849 CAEBREN_19849 Cbn-zif-1 Cbn-zif-1 Cbn-ndx-2 Cbn-ndx-2 CAEBREN_05840 CAEBREN_05840 CAEBREN_01972 CAEBREN_01972 CAEBREN_26247 CAEBREN_26247 Cbn-gld-2 Cbn-gld-2 CAEBREN_26293 CAEBREN_26293 CAEBREN_20414 CAEBREN_20414 CAEBREN_17040 CAEBREN_17040 Cbn-ntl-3 Cbn-ntl-3 Cbn-ccf-1 Cbn-ccf-1 CAEBREN_04009 CAEBREN_04009 CAEBREN_10517 CAEBREN_10517 CAEBREN_31668 CAEBREN_31668 Cbn-dcap-2 Cbn-dcap-2 CAEBREN_32635 CAEBREN_32635 CAEBREN_10841 CAEBREN_10841 CAEBREN_05211 CAEBREN_05211 LSM8 LSM8 CAEBREN_32665 CAEBREN_32665 CAEBREN_05859 CAEBREN_05859 Cbn-gld-1 Cbn-gld-1 CAEBREN_19479 CAEBREN_19479 CAEBREN_16769 CAEBREN_16769 Cbn-ndx-8 Cbn-ndx-8 Cbn-mex-1 Cbn-mex-1 CAEBREN_21517 CAEBREN_21517 CAEBREN_03758 CAEBREN_03758 CAEBREN_09035 CAEBREN_09035 CAEBREN_20623 CAEBREN_20623 CAEBREN_09943 CAEBREN_09943 CAEBREN_18850 CAEBREN_18850 CAEBREN_14944 CAEBREN_14944 CAEBREN_20762 CAEBREN_20762 CAEBREN_28808 CAEBREN_28808 Cbn-ccch-1 Cbn-ccch-1 CAEBREN_03522 CAEBREN_03522 CAEBREN_08092 CAEBREN_08092 CAEBREN_19677 CAEBREN_19677 CAEBREN_14153 CAEBREN_14153 CAEBREN_04440 CAEBREN_04440 CAEBREN_22331 CAEBREN_22331 CAEBREN_13963 CAEBREN_13963 CAEBREN_01481 CAEBREN_01481 Cbn-mex-3 Cbn-mex-3 CAEBREN_15320 CAEBREN_15320 CAEBREN_28211 CAEBREN_28211 CAEBREN_28060 CAEBREN_28060 CAEBREN_09322 CAEBREN_09322 CAEBREN_22702 CAEBREN_22702 CAEBREN_00822 CAEBREN_00822 CAEBREN_00329 CAEBREN_00329 Cbn-ife-3 Cbn-ife-3 CAEBREN_04846 CAEBREN_04846 CAEBREN_22260 CAEBREN_22260 CAEBREN_30011 CAEBREN_30011 CAEBREN_07988 CAEBREN_07988 CAEBREN_04295 CAEBREN_04295 CAEBREN_31868 CAEBREN_31868 CAEBREN_31775 CAEBREN_31775 CAEBREN_31186 CAEBREN_31186 CAEBREN_29137 CAEBREN_29137 CAEBREN_31007 CAEBREN_31007 CAEBREN_30869 CAEBREN_30869 CAEBREN_10805 CAEBREN_10805 CAEBREN_00394 CAEBREN_00394 CAEBREN_26387 CAEBREN_26387 CAEBREN_11650 CAEBREN_11650 LSM3 LSM3 CAEBREN_28761 CAEBREN_28761 CAEBREN_29145 CAEBREN_29145 CAEBREN_30557 CAEBREN_30557 fog-3 fog-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-puf-9CBN-PUF-9 protein. (688 aa)
CAEBREN_19977Uncharacterized protein. (150 aa)
CAEBREN_06588Uncharacterized protein. (230 aa)
CAEBREN_05352Uncharacterized protein. (510 aa)
CAEBREN_18183Uncharacterized protein. (176 aa)
CAEBREN_02701Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family. (206 aa)
CAEBREN_25845PAP-associated domain-containing protein. (476 aa)
Cbn-pab-2Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (707 aa)
CAEBREN_06394Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (212 aa)
CAEBREN_06480Smr domain-containing protein. (140 aa)
CAEBREN_02810Smr domain-containing protein. (138 aa)
Cbn-pqn-45CBN-PQN-45 protein. (754 aa)
CAEBREN_10519Uncharacterized protein. (329 aa)
CAEBREN_02448USP domain-containing protein. (1124 aa)
CAEBREN_01277Uncharacterized protein. (2626 aa)
CAEBREN_19695Uncharacterized protein; Belongs to the DEAD box helicase family. (402 aa)
CAEBREN_00053Peptidase C39 domain-containing protein. (233 aa)
CAEBREN_18124Uncharacterized protein. (404 aa)
Cbn-cgh-1CBN-CGH-1 protein; Belongs to the DEAD box helicase family. (430 aa)
CAEBREN_18620Uncharacterized protein. (259 aa)
CAEBREN_21321Uncharacterized protein. (349 aa)
CAEBREN_01839NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (234 aa)
CAEBREN_23525PAP-associated domain-containing protein. (845 aa)
Cbn-cpb-1CBN-CPB-1 protein. (598 aa)
CAEBREN_06531Pan3_PK domain-containing protein. (592 aa)
CAEBREN_17385GYF domain-containing protein. (374 aa)
CAEBREN_13034Uncharacterized protein; Belongs to the DEAD box helicase family. (689 aa)
CAEBREN_29536Uncharacterized protein. (529 aa)
Cbn-cey-4CBN-CEY-4 protein. (288 aa)
CAEBREN_14700PUM-HD domain-containing protein. (538 aa)
CAEBREN_15921RRM domain-containing protein. (653 aa)
CAEBREN_24563Uncharacterized protein. (499 aa)
CAEBREN_08045NOT2_3_5 domain-containing protein. (410 aa)
Cbn-dcap-1CBN-DCAP-1 protein. (332 aa)
CAEBREN_02711Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (77 aa)
CAEBREN_19781Uncharacterized protein; Belongs to the DEAD box helicase family. (797 aa)
CAEBREN_10092Uncharacterized protein; Belongs to the DEAD box helicase family. (786 aa)
CAEBREN_19476Nanos-type domain-containing protein; Belongs to the nanos family. (185 aa)
CAEBREN_00916Nanos-type domain-containing protein; Belongs to the nanos family. (192 aa)
CAEBREN_11725Nanos-type domain-containing protein; Belongs to the nanos family. (216 aa)
CAEBREN_24382Nanos-type domain-containing protein; Belongs to the nanos family. (165 aa)
CAEBREN_00444Uncharacterized protein. (175 aa)
CAEBREN_14163Nanos-type domain-containing protein; Belongs to the nanos family. (204 aa)
CAEBREN_24618Nanos-type domain-containing protein; Belongs to the nanos family. (190 aa)
CAEBREN_15455Uncharacterized protein. (754 aa)
CAEBREN_18035Uncharacterized protein. (320 aa)
CAEBREN_20533GYF domain-containing protein. (265 aa)
CAEBREN_25139Uncharacterized protein. (234 aa)
CAEBREN_00470Uncharacterized protein. (640 aa)
Cbn-lsm-1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (125 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
CAEBREN_24701Uncharacterized protein. (850 aa)
CAEBREN_06559F-box domain-containing protein. (308 aa)
CAEBREN_10930Uncharacterized protein. (443 aa)
CAEBREN_23663Uncharacterized protein. (105 aa)
Cbn-xrn-15'-3' exoribonuclease 1. (1684 aa)
CAEBREN_24130Uncharacterized protein. (486 aa)
CAEBREN_14362PUM-HD domain-containing protein. (644 aa)
CAEBREN_07483PUM-HD domain-containing protein. (363 aa)
CAEBREN_08752Uncharacterized protein. (389 aa)
CAEBREN_32378Uncharacterized protein. (678 aa)
CAEBREN_08981MIF4G domain-containing protein. (245 aa)
CAEBREN_17063Uncharacterized protein. (415 aa)
Cbn-ifg-1CBN-IFG-1 protein. (1174 aa)
Cbn-pup-3CBN-PUP-3 protein. (465 aa)
CAEBREN_17557Uncharacterized protein. (448 aa)
CAEBREN_07343PUM-HD domain-containing protein. (610 aa)
CAEBREN_29447Nanos-type domain-containing protein; Belongs to the nanos family. (1003 aa)
Cbn-ife-4CBN-IFE-4 protein; Belongs to the eukaryotic initiation factor 4E family. (215 aa)
CAEBREN_17593Uncharacterized protein. (72 aa)
CAEBREN_10094Uncharacterized protein. (341 aa)
Cbn-lsm-4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
Cbn-puf-8CBN-PUF-8 protein. (531 aa)
CAEBREN_13282RING-type domain-containing protein. (932 aa)
CAEBREN_32524Uncharacterized protein. (92 aa)
CAEBREN_32839Nanos-type domain-containing protein; Belongs to the nanos family. (258 aa)
CAEBREN_19142Uncharacterized protein. (416 aa)
Cbn-gld-3CBN-GLD-3 protein. (961 aa)
CAEBREN_19849Nudix hydrolase domain-containing protein. (260 aa)
Cbn-zif-1CBN-ZIF-1 protein. (508 aa)
Cbn-ndx-2CBN-NDX-2 protein; Belongs to the Nudix hydrolase family. (197 aa)
CAEBREN_05840Uncharacterized protein. (418 aa)
CAEBREN_01972RING-type domain-containing protein. (788 aa)
CAEBREN_26247Uncharacterized protein. (464 aa)
Cbn-gld-2CBN-GLD-2 protein. (869 aa)
CAEBREN_26293Uncharacterized protein. (1346 aa)
CAEBREN_20414Nudix hydrolase domain-containing protein. (446 aa)
CAEBREN_17040GYF domain-containing protein. (1114 aa)
Cbn-ntl-3CBN-NTL-3 protein. (730 aa)
Cbn-ccf-1CBN-CCF-1 protein. (309 aa)
CAEBREN_04009Uncharacterized protein. (78 aa)
CAEBREN_10517Uncharacterized protein. (830 aa)
CAEBREN_31668PUM-HD domain-containing protein. (298 aa)
Cbn-dcap-2CBN-DCAP-2 protein. (1989 aa)
CAEBREN_32635NOT2_3_5 domain-containing protein. (742 aa)
CAEBREN_10841RRM domain-containing protein. (654 aa)
CAEBREN_05211FHA domain-containing protein. (841 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
CAEBREN_32665Uncharacterized protein. (614 aa)
CAEBREN_05859Uncharacterized protein. (467 aa)
Cbn-gld-1CBN-GLD-1 protein. (474 aa)
CAEBREN_19479Endo/exonuclease/phosphatase domain-containing protein. (593 aa)
CAEBREN_16769PAP-associated domain-containing protein. (826 aa)
Cbn-ndx-8CBN-NDX-8 protein. (173 aa)
Cbn-mex-1CBN-MEX-1 protein. (501 aa)
CAEBREN_21517KH domain-containing protein. (474 aa)
CAEBREN_03758Uncharacterized protein. (829 aa)
CAEBREN_09035Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (233 aa)
CAEBREN_20623RRM domain-containing protein. (755 aa)
CAEBREN_09943LSM14 domain-containing protein. (458 aa)
CAEBREN_18850Uncharacterized protein. (343 aa)
CAEBREN_14944Endo/exonuclease/phosphatase domain-containing protein. (597 aa)
CAEBREN_20762PUM-HD domain-containing protein. (575 aa)
CAEBREN_28808Uncharacterized protein. (405 aa)
Cbn-ccch-1CBN-CCCH-1 protein. (465 aa)
CAEBREN_03522Nanos-type domain-containing protein; Belongs to the nanos family. (351 aa)
CAEBREN_08092Nanos-type domain-containing protein; Belongs to the nanos family. (186 aa)
CAEBREN_19677Nanos-type domain-containing protein; Belongs to the nanos family. (165 aa)
CAEBREN_14153Nanos-type domain-containing protein; Belongs to the nanos family. (237 aa)
CAEBREN_04440Nanos-type domain-containing protein; Belongs to the nanos family. (158 aa)
CAEBREN_22331Uncharacterized protein. (303 aa)
CAEBREN_13963Nanos-type domain-containing protein; Belongs to the nanos family. (185 aa)
CAEBREN_01481PUM-HD domain-containing protein. (644 aa)
Cbn-mex-3CBN-MEX-3 protein. (518 aa)
CAEBREN_15320Uncharacterized protein. (73 aa)
CAEBREN_28211Uncharacterized protein. (485 aa)
CAEBREN_28060PUM-HD domain-containing protein. (549 aa)
CAEBREN_09322Nudix hydrolase domain-containing protein. (260 aa)
CAEBREN_22702Uncharacterized protein. (255 aa)
CAEBREN_00822Uncharacterized protein. (102 aa)
CAEBREN_00329Uncharacterized protein. (296 aa)
Cbn-ife-3CBN-IFE-3 protein; Belongs to the eukaryotic initiation factor 4E family. (243 aa)
CAEBREN_04846Uncharacterized protein. (103 aa)
CAEBREN_22260CSD_1 domain-containing protein. (267 aa)
CAEBREN_30011Uncharacterized protein. (208 aa)
CAEBREN_07988RRM domain-containing protein. (680 aa)
CAEBREN_04295Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (649 aa)
CAEBREN_31868FHA domain-containing protein. (913 aa)
CAEBREN_31775Nudix hydrolase domain-containing protein. (2099 aa)
CAEBREN_31186Uncharacterized protein. (468 aa)
CAEBREN_29137SMP-LTD domain-containing protein. (958 aa)
CAEBREN_31007MIF4G domain-containing protein. (1178 aa)
CAEBREN_30869NOT2_3_5 domain-containing protein. (303 aa)
CAEBREN_10805RRM domain-containing protein. (554 aa)
CAEBREN_00394Nudix hydrolase domain-containing protein. (309 aa)
CAEBREN_26387NOT2_3_5 domain-containing protein. (734 aa)
CAEBREN_11650Nudix hydrolase domain-containing protein. (446 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
CAEBREN_28761XRN_N domain-containing protein. (274 aa)
CAEBREN_29145Helicase C-terminal domain-containing protein. (203 aa)
CAEBREN_30557PUM-HD domain-containing protein. (179 aa)
fog-3FOG-3. (256 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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