(21 nodes) Troponin, and Myosin II complex network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tnc-1	Troponin C. (161 aa)
	Cbn-tni-1	CBN-TNI-1 protein. (248 aa)
	Cbn-nmy-1	CBN-NMY-1 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1957 aa)
	CAEBREN_15205	Uncharacterized protein. (170 aa)
	CAEBREN_11988	Uncharacterized protein. (170 aa)
	Cbn-lev-11	CBN-LEV-11 protein; Belongs to the tropomyosin family. (517 aa)
	CAEBREN_07889	Uncharacterized protein. (172 aa)
	CAEBREN_22778	Uncharacterized protein. (153 aa)
	CAEBREN_02413	Uncharacterized protein. (156 aa)
	Cbn-mlc-3	CBN-MLC-3 protein. (152 aa)
	CAEBREN_30569	Uncharacterized protein. (142 aa)
	CAEBREN_02160	Uncharacterized protein. (349 aa)
	Cbn-tnt-3	CBN-TNT-3 protein. (1010 aa)
	Cbn-tni-3	CBN-TNI-3 protein. (261 aa)
	Cbn-tnt-2	CBN-TNT-2 protein. (426 aa)
	Cbn-unc-27	CBN-UNC-27 protein. (243 aa)
	Cbn-tni-4	CBN-TNI-4 protein. (194 aa)
	CAEBREN_24925	Myosin_tail_1 domain-containing protein. (539 aa)
	CAEBREN_01678	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (297 aa)
	CAEBREN_30667	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1888 aa)
	CAEBREN_28556	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1201 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_01678	CAEBREN_02160	G0PBP2	G0MTD0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.711
CAEBREN_01678	CAEBREN_02413	G0PBP2	G0ML63	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.950
CAEBREN_01678	CAEBREN_07889	G0PBP2	G0MKR0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.952
CAEBREN_01678	CAEBREN_11988	G0PBP2	G0MIE4	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.831
CAEBREN_01678	CAEBREN_15205	G0PBP2	G0MIE3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.831
CAEBREN_01678	CAEBREN_22778	G0PBP2	G0ML46	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.874
CAEBREN_01678	CAEBREN_24925	G0PBP2	G0P5D5	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin_tail_1 domain-containing protein.	0.682
CAEBREN_01678	CAEBREN_28556	G0PBP2	G0PMY3	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.844
CAEBREN_01678	CAEBREN_30569	G0PBP2	G0MSR7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.711
CAEBREN_01678	CAEBREN_30667	G0PBP2	G0PFR4	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.423
CAEBREN_01678	Cbn-lev-11	G0PBP2	G0MJN0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-LEV-11 protein; Belongs to the tropomyosin family.	0.903
CAEBREN_01678	Cbn-mlc-3	G0PBP2	G0MPK8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-MLC-3 protein.	0.903
CAEBREN_01678	Cbn-nmy-1	G0PBP2	G0M6Z5	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-NMY-1 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.679
CAEBREN_01678	Cbn-tni-1	G0PBP2	G0M6P8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-TNI-1 protein.	0.773
CAEBREN_01678	Cbn-tni-3	G0PBP2	G0N1B5	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-TNI-3 protein.	0.773
CAEBREN_01678	Cbn-tni-4	G0PBP2	G0NRF8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-TNI-4 protein.	0.773
CAEBREN_01678	Cbn-tnt-2	G0PBP2	G0NFB1	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-TNT-2 protein.	0.711
CAEBREN_01678	Cbn-tnt-3	G0PBP2	G0MWD2	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-TNT-3 protein.	0.711
CAEBREN_01678	Cbn-unc-27	G0PBP2	G0NFE9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-UNC-27 protein.	0.773
CAEBREN_01678	tnc-1	G0PBP2	B3GDA0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Troponin C.	0.655

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