STRINGSTRING
Cbn-pme-2 Cbn-pme-2 Cbn-pme-1 Cbn-pme-1 CAEBREN_01034 CAEBREN_01034 CAEBREN_31931 CAEBREN_31931 CAEBREN_11063 CAEBREN_11063
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-pme-2Poly [ADP-ribose] polymerase. (519 aa)
Cbn-pme-1Poly [ADP-ribose] polymerase. (403 aa)
CAEBREN_01034Uncharacterized protein. (315 aa)
CAEBREN_31931Poly [ADP-ribose] polymerase. (915 aa)
CAEBREN_11063Uncharacterized protein. (456 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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