(78 nodes) Mixed, incl. Mitochondrial protein import, and Mitochondrial calcium ion transport network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_10934	Uncharacterized protein. (728 aa)
	Cbn-sto-3	CBN-STO-3 protein. (270 aa)
	Cbn-sto-4	CBN-STO-4 protein. (281 aa)
	CAEBREN_21841	Uncharacterized protein. (114 aa)
	Cbn-tag-299	CBN-TAG-299 protein. (89 aa)
	CAEBREN_00167	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (780 aa)
	CAEBREN_19452	Uncharacterized protein. (140 aa)
	CAEBREN_01788	CHCH domain-containing protein. (115 aa)
	Cbn-rom-1	CBN-ROM-1 protein; Belongs to the peptidase S54 family. (356 aa)
	CAEBREN_04040	PHB domain-containing protein. (323 aa)
	Cbn-tomm-7	CBN-TOMM-7 protein. (58 aa)
	CAEBREN_08501	DH domain-containing protein. (694 aa)
	CAEBREN_12849	Uncharacterized protein. (414 aa)
	Cbn-cri-3	CBN-CRI-3 protein. (236 aa)
	CAEBREN_10910	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (237 aa)
	Cbn-ymel-1	CBN-YMEL-1 protein. (712 aa)
	CAEBREN_10077	Sulfhydryl oxidase. (165 aa)
	CAEBREN_22781	Uncharacterized protein. (184 aa)
	CAEBREN_21471	Uncharacterized protein. (279 aa)
	CAEBREN_00012	Uncharacterized protein. (459 aa)
	CAEBREN_11387	Uncharacterized protein; Belongs to the heat shock protein 70 family. (661 aa)
	CAEBREN_04072	Uncharacterized protein. (214 aa)
	Cbn-mff-1	CBN-MFF-1 protein. (103 aa)
	CAEBREN_05504	Prohibitin. (294 aa)
	Cbn-ppgn-1	CBN-PPGN-1 protein. (743 aa)
	Cbn-tomm-22	CBN-TOMM-22 protein. (108 aa)
	CAEBREN_10347	Uncharacterized protein. (267 aa)
	CAEBREN_03383	MCU domain-containing protein. (332 aa)
	CAEBREN_03563	TPR_REGION domain-containing protein. (624 aa)
	CAEBREN_19219	Uncharacterized protein. (116 aa)
	CAEBREN_12521	Uncharacterized protein. (171 aa)
	CAEBREN_14190	BHLH domain-containing protein. (323 aa)
	CAEBREN_01262	Uncharacterized protein. (590 aa)
	Cbn-bcs-1	CBN-BCS-1 protein; Belongs to the AAA ATPase family. (441 aa)
	CAEBREN_12853	PHB domain-containing protein. (412 aa)
	CAEBREN_22196	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (976 aa)
	CAEBREN_16508	Uncharacterized protein. (242 aa)
	CAEBREN_02325	Uncharacterized protein. (196 aa)
	CAEBREN_21249	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (425 aa)
	Cbn-sto-1	CBN-STO-1 protein. (330 aa)
	Cbn-clpp-1	ATP-dependent Clp protease proteolytic subunit. (223 aa)
	CAEBREN_03186	Uncharacterized protein. (308 aa)
	Cbn-tomm-40	CBN-TOMM-40 protein. (301 aa)
	Cbn-tin-13	CBN-TIN-13 protein; Belongs to the small Tim family. (108 aa)
	CAEBREN_21656	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (976 aa)
	CAEBREN_30244	AAA domain-containing protein; Belongs to the AAA ATPase family. (613 aa)
	CAEBREN_28276	Peptidase_M41 domain-containing protein. (130 aa)
	CAEBREN_08538	MCU domain-containing protein. (332 aa)
	CAEBREN_24552	Uncharacterized protein. (94 aa)
	CAEBREN_03694	Uncharacterized protein. (590 aa)
	CAEBREN_06765	DAGKc domain-containing protein. (439 aa)
	CAEBREN_03176	PHB domain-containing protein. (412 aa)
	CAEBREN_23484	Uncharacterized protein. (581 aa)
	CAEBREN_22761	BHLH domain-containing protein. (429 aa)
	CAEBREN_05526	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (82 aa)
	CAEBREN_21252	Uncharacterized protein. (219 aa)
	CAEBREN_20556	zf-Tim10_DDP domain-containing protein. (78 aa)
	CAEBREN_19846	Prohibitin. (275 aa)
	Cbn-dnj-21	CBN-DNJ-21 protein. (112 aa)
	Cbn-tin-10	CBN-TIN-10 protein. (86 aa)
	Cbn-scpl-4	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (456 aa)
	CAEBREN_19999	Uncharacterized protein. (94 aa)
	CAEBREN_04608	Uncharacterized protein. (520 aa)
	CAEBREN_11909	TFIIIC_sub6 domain-containing protein. (161 aa)
	CAEBREN_25349	FCP1 homology domain-containing protein. (250 aa)
	CAEBREN_20157	Sulfhydryl oxidase. (162 aa)
	CAEBREN_25386	PHB domain-containing protein. (323 aa)
	Cbn-spg-7	CBN-SPG-7 protein. (779 aa)
	CAEBREN_21755	Prohibitin. (195 aa)
	CAEBREN_28352	Uncharacterized protein. (830 aa)
	CAEBREN_31231	PH domain-containing protein. (155 aa)
	CAEBREN_30004	Uncharacterized protein. (208 aa)
	CAEBREN_32708	Uncharacterized protein. (455 aa)
	CAEBREN_22254	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (236 aa)
	CAEBREN_06270	Uncharacterized protein. (341 aa)
	Cbn-tomm-20	CBN-TOMM-20 protein. (188 aa)
	CAEBREN_09520	Uncharacterized protein. (471 aa)
	CAEBREN_28208	Uncharacterized protein. (539 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00012	CAEBREN_03176	G0MSF3	G0P269	Uncharacterized protein.	PHB domain-containing protein.	0.631
CAEBREN_00012	CAEBREN_03383	G0MSF3	G0NA44	Uncharacterized protein.	MCU domain-containing protein.	0.934
CAEBREN_00012	CAEBREN_04040	G0MSF3	G0MFT4	Uncharacterized protein.	PHB domain-containing protein.	0.630
CAEBREN_00012	CAEBREN_05504	G0MSF3	G0MZI3	Uncharacterized protein.	Prohibitin.	0.806
CAEBREN_00012	CAEBREN_08501	G0MSF3	G0MH79	Uncharacterized protein.	DH domain-containing protein.	0.714
CAEBREN_00012	CAEBREN_08538	G0MSF3	G0NVZ6	Uncharacterized protein.	MCU domain-containing protein.	0.934
CAEBREN_00012	CAEBREN_10347	G0MSF3	G0N9L8	Uncharacterized protein.	Uncharacterized protein.	0.630
CAEBREN_00012	CAEBREN_10934	G0MSF3	G0M6H3	Uncharacterized protein.	Uncharacterized protein.	0.714
CAEBREN_00012	CAEBREN_12849	G0MSF3	G0MKC7	Uncharacterized protein.	Uncharacterized protein.	0.714
CAEBREN_00012	CAEBREN_12853	G0MSF3	G0NG41	Uncharacterized protein.	PHB domain-containing protein.	0.631
CAEBREN_00012	CAEBREN_16508	G0MSF3	G0NIG0	Uncharacterized protein.	Uncharacterized protein.	0.468
CAEBREN_00012	CAEBREN_19846	G0MSF3	G0P5G7	Uncharacterized protein.	Prohibitin.	0.737
CAEBREN_00012	CAEBREN_21755	G0MSF3	G0PGI1	Uncharacterized protein.	Prohibitin.	0.806
CAEBREN_00012	CAEBREN_21841	G0MSF3	G0M8R7	Uncharacterized protein.	Uncharacterized protein.	0.630
CAEBREN_00012	CAEBREN_25386	G0MSF3	G0PCU9	Uncharacterized protein.	PHB domain-containing protein.	0.630
CAEBREN_00012	CAEBREN_28208	G0MSF3	G0PNP8	Uncharacterized protein.	Uncharacterized protein.	0.987
CAEBREN_00012	CAEBREN_28276	G0MSF3	G0NVW9	Uncharacterized protein.	Peptidase_M41 domain-containing protein.	0.664
CAEBREN_00012	CAEBREN_28352	G0MSF3	G0PIK3	Uncharacterized protein.	Uncharacterized protein.	0.714
CAEBREN_00012	CAEBREN_30004	G0MSF3	G0PK18	Uncharacterized protein.	Uncharacterized protein.	0.630
CAEBREN_00012	CAEBREN_30244	G0MSF3	G0NVW8	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.664

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