(32 nodes) Mitochondrial protein import, and Outer mitochondrial membrane protein complex network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_19452	Uncharacterized protein. (140 aa)
	CAEBREN_01788	CHCH domain-containing protein. (115 aa)
	Cbn-tomm-7	CBN-TOMM-7 protein. (58 aa)
	CAEBREN_10910	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (237 aa)
	CAEBREN_10077	Sulfhydryl oxidase. (165 aa)
	CAEBREN_21471	Uncharacterized protein. (279 aa)
	CAEBREN_11387	Uncharacterized protein; Belongs to the heat shock protein 70 family. (661 aa)
	Cbn-mff-1	CBN-MFF-1 protein. (103 aa)
	Cbn-tomm-22	CBN-TOMM-22 protein. (108 aa)
	CAEBREN_03563	TPR_REGION domain-containing protein. (624 aa)
	CAEBREN_19219	Uncharacterized protein. (116 aa)
	CAEBREN_12521	Uncharacterized protein. (171 aa)
	CAEBREN_14190	BHLH domain-containing protein. (323 aa)
	CAEBREN_16508	Uncharacterized protein. (242 aa)
	CAEBREN_02325	Uncharacterized protein. (196 aa)
	CAEBREN_21249	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (425 aa)
	Cbn-tomm-40	CBN-TOMM-40 protein. (301 aa)
	Cbn-tin-13	CBN-TIN-13 protein; Belongs to the small Tim family. (108 aa)
	CAEBREN_24552	Uncharacterized protein. (94 aa)
	CAEBREN_23484	Uncharacterized protein. (581 aa)
	CAEBREN_22761	BHLH domain-containing protein. (429 aa)
	CAEBREN_05526	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (82 aa)
	CAEBREN_21252	Uncharacterized protein. (219 aa)
	Cbn-dnj-21	CBN-DNJ-21 protein. (112 aa)
	Cbn-scpl-4	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (456 aa)
	CAEBREN_19999	Uncharacterized protein. (94 aa)
	CAEBREN_25349	FCP1 homology domain-containing protein. (250 aa)
	CAEBREN_20157	Sulfhydryl oxidase. (162 aa)
	CAEBREN_32708	Uncharacterized protein. (455 aa)
	CAEBREN_22254	Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (236 aa)
	CAEBREN_06270	Uncharacterized protein. (341 aa)
	Cbn-tomm-20	CBN-TOMM-20 protein. (188 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_01788	CAEBREN_03563	G0MDX1	G0NB27	CHCH domain-containing protein.	TPR_REGION domain-containing protein.	0.474
CAEBREN_01788	CAEBREN_05526	G0MDX1	G0P3Y0	CHCH domain-containing protein.	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.	0.743
CAEBREN_01788	CAEBREN_10077	G0MDX1	G0MM91	CHCH domain-containing protein.	Sulfhydryl oxidase.	0.914
CAEBREN_01788	CAEBREN_12521	G0MDX1	G0NBH2	CHCH domain-containing protein.	Uncharacterized protein.	0.819
CAEBREN_01788	CAEBREN_14190	G0MDX1	G0NBP0	CHCH domain-containing protein.	BHLH domain-containing protein.	0.743
CAEBREN_01788	CAEBREN_16508	G0MDX1	G0NIG0	CHCH domain-containing protein.	Uncharacterized protein.	0.576
CAEBREN_01788	CAEBREN_19219	G0MDX1	G0NBH0	CHCH domain-containing protein.	Uncharacterized protein.	0.819
CAEBREN_01788	CAEBREN_19999	G0MDX1	G0PBI5	CHCH domain-containing protein.	Uncharacterized protein.	0.747
CAEBREN_01788	CAEBREN_20157	G0MDX1	G0PCN2	CHCH domain-containing protein.	Sulfhydryl oxidase.	0.914
CAEBREN_01788	CAEBREN_21252	G0MDX1	G0P432	CHCH domain-containing protein.	Uncharacterized protein.	0.499
CAEBREN_01788	CAEBREN_22761	G0MDX1	G0P3X9	CHCH domain-containing protein.	BHLH domain-containing protein.	0.743
CAEBREN_01788	CAEBREN_24552	G0MDX1	G0NYM2	CHCH domain-containing protein.	Uncharacterized protein.	0.747
CAEBREN_01788	Cbn-dnj-21	G0MDX1	G0P6F2	CHCH domain-containing protein.	CBN-DNJ-21 protein.	0.644
CAEBREN_01788	Cbn-scpl-4	G0MDX1	G0P9L7	CHCH domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.505
CAEBREN_01788	Cbn-tin-13	G0MDX1	G0NUX2	CHCH domain-containing protein.	CBN-TIN-13 protein; Belongs to the small Tim family.	0.819
CAEBREN_01788	Cbn-tomm-22	G0MDX1	G0N4U0	CHCH domain-containing protein.	CBN-TOMM-22 protein.	0.534
CAEBREN_01788	Cbn-tomm-40	G0MDX1	G0NP19	CHCH domain-containing protein.	CBN-TOMM-40 protein.	0.573
CAEBREN_02325	CAEBREN_03563	G0NII3	G0NB27	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.941
CAEBREN_02325	CAEBREN_16508	G0NII3	G0NIG0	Uncharacterized protein.	Uncharacterized protein.	0.567
CAEBREN_02325	CAEBREN_21249	G0NII3	G0NK47	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.488

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