(31 nodes) Intraciliary transport particle, and GMC oxidoreductase network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbn-osm-5	CBN-OSM-5 protein. (825 aa)
	Cbn-ift-81	CBN-IFT-81 protein. (654 aa)
	CAEBREN_07292	Uncharacterized protein. (129 aa)
	CAEBREN_13813	Uncharacterized protein. (1738 aa)
	Cbn-dyf-6	CBN-DYF-6 protein. (325 aa)
	Cbn-dyf-2	CBN-DYF-2 protein. (681 aa)
	CAEBREN_04184	Uncharacterized protein. (1313 aa)
	CAEBREN_28654	Uncharacterized protein. (1450 aa)
	Cbn-ifta-2	CBN-IFTA-2 protein. (232 aa)
	CAEBREN_00726	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (646 aa)
	CAEBREN_32658	Uncharacterized protein. (385 aa)
	CAEBREN_29801	Uncharacterized protein. (554 aa)
	Cbn-che-2	CBN-CHE-2 protein. (761 aa)
	Cbn-dyf-11	CBN-DYF-11 protein. (551 aa)
	CAEBREN_25455	Uncharacterized protein. (542 aa)
	CAEBREN_10651	Uncharacterized protein. (551 aa)
	Cbn-osm-6	CBN-OSM-6 protein. (471 aa)
	Cbn-daf-10	CBN-DAF-10 protein. (1239 aa)
	CAEBREN_16930	Uncharacterized protein. (626 aa)
	CAEBREN_31382	Uncharacterized protein. (710 aa)
	CAEBREN_15336	ANAPC4_WD40 domain-containing protein. (660 aa)
	CAEBREN_32059	TPR_REGION domain-containing protein. (680 aa)
	CAEBREN_15478	Uncharacterized protein. (129 aa)
	Cbn-che-13	CBN-CHE-13 protein. (253 aa)
	CAEBREN_03750	Uncharacterized protein. (598 aa)
	CAEBREN_09798	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (874 aa)
	Cbn-klp-11	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (320 aa)
	CAEBREN_29399	TPR_REGION domain-containing protein. (662 aa)
	CAEBREN_29520	Uncharacterized protein. (463 aa)
	CAEBREN_06971	Uncharacterized protein. (278 aa)
	CAEBREN_25332	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (170 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00726	CAEBREN_03750	G0MYP5	G0P6A8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.500
CAEBREN_00726	CAEBREN_04184	G0MYP5	G0MLI3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.827
CAEBREN_00726	CAEBREN_06971	G0MYP5	G0PJC4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.748
CAEBREN_00726	CAEBREN_07292	G0MYP5	G0MF46	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.651
CAEBREN_00726	CAEBREN_09798	G0MYP5	G0PA72	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.995
CAEBREN_00726	CAEBREN_10651	G0MYP5	G0N9T0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.773
CAEBREN_00726	CAEBREN_13813	G0MYP5	G0MHI3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.824
CAEBREN_00726	CAEBREN_15336	G0MYP5	G0NSP0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	ANAPC4_WD40 domain-containing protein.	0.773
CAEBREN_00726	CAEBREN_15478	G0MYP5	G0NXZ8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.709
CAEBREN_00726	CAEBREN_16930	G0MYP5	G0NR21	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.766
CAEBREN_00726	CAEBREN_25332	G0MYP5	G0PMT4	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.959
CAEBREN_00726	CAEBREN_25455	G0MYP5	G0N9S6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.774
CAEBREN_00726	CAEBREN_28654	G0MYP5	G0MPB8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.725
CAEBREN_00726	CAEBREN_29399	G0MYP5	G0PIR1	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPR_REGION domain-containing protein.	0.857
CAEBREN_00726	CAEBREN_29520	G0MYP5	G0PJ72	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.784
CAEBREN_00726	CAEBREN_29801	G0MYP5	G0N3M0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.500
CAEBREN_00726	CAEBREN_31382	G0MYP5	G0NS61	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.999
CAEBREN_00726	CAEBREN_32059	G0MYP5	G0NUF2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	TPR_REGION domain-containing protein.	0.857
CAEBREN_00726	CAEBREN_32658	G0MYP5	G0N282	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.789
CAEBREN_00726	Cbn-che-13	G0MYP5	G0NY00	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	CBN-CHE-13 protein.	0.742

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