(32 nodes) Norepinephrine Neurotransmitter Release Cycle, and Vesicle fusion to plasma membrane network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_11096	V-SNARE coiled-coil homology domain-containing protein. (108 aa)
	Cbn-tag-81	CBN-TAG-81 protein. (234 aa)
	Cbn-syx-3	CBN-SYX-3 protein; Belongs to the syntaxin family. (306 aa)
	CAEBREN_17069	Uncharacterized protein. (466 aa)
	Cbn-syx-2	CBN-SYX-2 protein. (299 aa)
	CAEBREN_26020	C2 domain-containing protein. (429 aa)
	Cbn-cpx-2	CBN-CPX-2 protein. (145 aa)
	Cbn-unc-64	CBN-UNC-64 protein; Belongs to the syntaxin family. (293 aa)
	CAEBREN_12911	Uncharacterized protein. (143 aa)
	CAEBREN_05098	V-SNARE coiled-coil homology domain-containing protein. (115 aa)
	Cbn-unc-18	CBN-UNC-18 protein; Belongs to the STXBP/unc-18/SEC1 family. (590 aa)
	CAEBREN_31448	Uncharacterized protein. (366 aa)
	Cbn-unc-10	CBN-UNC-10 protein. (1638 aa)
	Cbn-snb-7	CBN-SNB-7 protein. (101 aa)
	Cbn-mltn-9	CBN-MLTN-9 protein. (1063 aa)
	Cbn-ric-4	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (577 aa)
	Cbn-rab-3	CBN-RAB-3 protein. (219 aa)
	CAEBREN_05905	Uncharacterized protein. (1299 aa)
	CAEBREN_02463	Uncharacterized protein. (1668 aa)
	CAEBREN_17793	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (291 aa)
	Cbn-syn-4	CBN-SYN-4 protein; Belongs to the syntaxin family. (255 aa)
	CAEBREN_32094	Uncharacterized protein. (442 aa)
	CAEBREN_31616	Uncharacterized protein. (332 aa)
	CAEBREN_30798	Uncharacterized protein. (417 aa)
	CAEBREN_08912	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (555 aa)
	Cbn-snt-4	CBN-SNT-4 protein. (382 aa)
	CAEBREN_17280	Uncharacterized protein. (1646 aa)
	CAEBREN_21834	Uncharacterized protein. (1411 aa)
	Cbn-sph-1	CBN-SPH-1 protein. (227 aa)
	CAEBREN_29767	C2 domain-containing protein. (838 aa)
	CAEBREN_29867	Uncharacterized protein. (340 aa)
	CAEBREN_30856	Uncharacterized protein. (283 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_02463	CAEBREN_05098	G0NCU2	G0MP40	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.762
CAEBREN_02463	CAEBREN_05905	G0NCU2	G0NBP4	Uncharacterized protein.	Uncharacterized protein.	0.880
CAEBREN_02463	CAEBREN_08912	G0NCU2	G0NYC9	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.880
CAEBREN_02463	CAEBREN_11096	G0NCU2	B6VBI7	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.762
CAEBREN_02463	CAEBREN_12911	G0NCU2	G0MNR9	Uncharacterized protein.	Uncharacterized protein.	0.738
CAEBREN_02463	CAEBREN_17069	G0NCU2	G0M9A8	Uncharacterized protein.	Uncharacterized protein.	0.785
CAEBREN_02463	CAEBREN_17793	G0NCU2	G0NFP6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.720
CAEBREN_02463	CAEBREN_21834	G0NCU2	G0P3X4	Uncharacterized protein.	Uncharacterized protein.	0.880
CAEBREN_02463	CAEBREN_26020	G0NCU2	G0MAY9	Uncharacterized protein.	C2 domain-containing protein.	0.785
CAEBREN_02463	CAEBREN_29767	G0NCU2	G0P6X9	Uncharacterized protein.	C2 domain-containing protein.	0.869
CAEBREN_02463	CAEBREN_30798	G0NCU2	G0NYB9	Uncharacterized protein.	Uncharacterized protein.	0.751
CAEBREN_02463	CAEBREN_30856	G0NCU2	G0PMH1	Uncharacterized protein.	Uncharacterized protein.	0.851
CAEBREN_02463	CAEBREN_31448	G0NCU2	G0MYW8	Uncharacterized protein.	Uncharacterized protein.	0.573
CAEBREN_02463	CAEBREN_31616	G0NCU2	G0NRT4	Uncharacterized protein.	Uncharacterized protein.	0.869
CAEBREN_02463	CAEBREN_32094	G0NCU2	G0NQX7	Uncharacterized protein.	Uncharacterized protein.	0.864
CAEBREN_02463	Cbn-cpx-2	G0NCU2	G0MBN0	Uncharacterized protein.	CBN-CPX-2 protein.	0.738
CAEBREN_02463	Cbn-mltn-9	G0NCU2	G0N6Z7	Uncharacterized protein.	CBN-MLTN-9 protein.	0.814
CAEBREN_02463	Cbn-rab-3	G0NCU2	G0NAS9	Uncharacterized protein.	CBN-RAB-3 protein.	0.851
CAEBREN_02463	Cbn-ric-4	G0NCU2	G0N910	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.832
CAEBREN_02463	Cbn-snb-7	G0NCU2	G0N5F7	Uncharacterized protein.	CBN-SNB-7 protein.	0.806

page 1 of 46

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About