STRINGSTRING
Cbn-rpt-4 Cbn-rpt-4 Cbn-rpn-3 Cbn-rpn-3 CAEBREN_21343 CAEBREN_21343 Cbn-rpn-6.1 Cbn-rpn-6.1 CAEBREN_19543 CAEBREN_19543 CAEBREN_10825 CAEBREN_10825 Cbn-pbs-5 Cbn-pbs-5 Cbn-rpt-3 Cbn-rpt-3 CAEBREN_25310 CAEBREN_25310 CAEBREN_07828 CAEBREN_07828 Cbn-rpn-9 Cbn-rpn-9 CAEBREN_09169 CAEBREN_09169 CAEBREN_12205 CAEBREN_12205 CAEBREN_16611 CAEBREN_16611 Cbn-rpn-2 Cbn-rpn-2 CAEBREN_24903 CAEBREN_24903 CAEBREN_16810 CAEBREN_16810 CAEBREN_04435 CAEBREN_04435 Cbn-pbs-6 Cbn-pbs-6 CAEBREN_19051 CAEBREN_19051 Cbn-pbs-1 Cbn-pbs-1 CAEBREN_26093 CAEBREN_26093 CAEBREN_24517 CAEBREN_24517 Cbn-pas-2 Cbn-pas-2 Cbn-rpn-6.2 Cbn-rpn-6.2 Cbn-rpn-11 Cbn-rpn-11 CAEBREN_11319 CAEBREN_11319 CAEBREN_09100 CAEBREN_09100 CAEBREN_23971 CAEBREN_23971 CAEBREN_17091 CAEBREN_17091 CAEBREN_12167 CAEBREN_12167 Cbn-pas-1 Cbn-pas-1 CAEBREN_16307 CAEBREN_16307 CAEBREN_12847 CAEBREN_12847 CAEBREN_13512 CAEBREN_13512 CAEBREN_21868 CAEBREN_21868 CAEBREN_26131 CAEBREN_26131 CAEBREN_10201 CAEBREN_10201 CAEBREN_14335 CAEBREN_14335 CAEBREN_22940 CAEBREN_22940 CAEBREN_02656 CAEBREN_02656 Cbn-usp-14 Cbn-usp-14 CAEBREN_10399 CAEBREN_10399 CAEBREN_15361 CAEBREN_15361 CAEBREN_08511 CAEBREN_08511 Cbn-pas-3 Cbn-pas-3 Cbn-rpt-5 Cbn-rpt-5 CAEBREN_19796 CAEBREN_19796 CAEBREN_12279 CAEBREN_12279 CAEBREN_01834 CAEBREN_01834 CAEBREN_17617 CAEBREN_17617 CAEBREN_23567 CAEBREN_23567 CAEBREN_29615 CAEBREN_29615 CAEBREN_03269 CAEBREN_03269 CAEBREN_23993 CAEBREN_23993 CAEBREN_16884 CAEBREN_16884 Cbn-rpt-1 Cbn-rpt-1 Cbn-pas-6 Cbn-pas-6 CAEBREN_22031 CAEBREN_22031
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-rpt-4CBN-RPT-4 protein; Belongs to the AAA ATPase family. (398 aa)
Cbn-rpn-3CBN-RPN-3 protein. (505 aa)
CAEBREN_21343Uncharacterized protein. (491 aa)
Cbn-rpn-6.1CBN-RPN-6.1 protein. (420 aa)
CAEBREN_19543MPN domain-containing protein. (319 aa)
CAEBREN_10825Proteasome subunit beta. (277 aa)
Cbn-pbs-5CBN-PBS-5 protein. (284 aa)
Cbn-rpt-3CBN-RPT-3 protein; Belongs to the AAA ATPase family. (419 aa)
CAEBREN_25310Proteasome subunit beta. (223 aa)
CAEBREN_07828Uncharacterized protein. (118 aa)
Cbn-rpn-9CBN-RPN-9 protein. (390 aa)
CAEBREN_09169Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (268 aa)
CAEBREN_12205AAA domain-containing protein; Belongs to the AAA ATPase family. (443 aa)
CAEBREN_16611AAA domain-containing protein; Belongs to the AAA ATPase family. (417 aa)
Cbn-rpn-226S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (1016 aa)
CAEBREN_24903Uncharacterized protein. (163 aa)
CAEBREN_16810RPN13_C domain-containing protein. (397 aa)
CAEBREN_04435AAA domain-containing protein; Belongs to the AAA ATPase family. (268 aa)
Cbn-pbs-6Proteasome subunit beta. (258 aa)
CAEBREN_19051AAA domain-containing protein; Belongs to the AAA ATPase family. (416 aa)
Cbn-pbs-1Proteasome subunit beta. (239 aa)
CAEBREN_26093AAA domain-containing protein; Belongs to the AAA ATPase family. (438 aa)
CAEBREN_24517PCI domain-containing protein. (491 aa)
Cbn-pas-2Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (231 aa)
Cbn-rpn-6.2CBN-RPN-6.2 protein. (345 aa)
Cbn-rpn-11CBN-RPN-11 protein. (312 aa)
CAEBREN_11319Uncharacterized protein. (134 aa)
CAEBREN_09100AAA domain-containing protein; Belongs to the AAA ATPase family. (418 aa)
CAEBREN_23971Uncharacterized protein. (264 aa)
CAEBREN_17091VWFA domain-containing protein. (348 aa)
CAEBREN_12167MPN domain-containing protein. (363 aa)
Cbn-pas-1Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (168 aa)
CAEBREN_16307AAA domain-containing protein; Belongs to the AAA ATPase family. (411 aa)
CAEBREN_12847AAA domain-containing protein; Belongs to the AAA ATPase family. (411 aa)
CAEBREN_13512Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (253 aa)
CAEBREN_21868Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (169 aa)
CAEBREN_26131Proteasome subunit beta; Belongs to the peptidase T1B family. (236 aa)
CAEBREN_10201VWFA domain-containing protein. (348 aa)
CAEBREN_14335Ubiquitin carboxyl-terminal hydrolase. (319 aa)
CAEBREN_22940PCI domain-containing protein. (409 aa)
CAEBREN_02656Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (248 aa)
Cbn-usp-14Ubiquitin carboxyl-terminal hydrolase. (488 aa)
CAEBREN_10399AAA domain-containing protein; Belongs to the AAA ATPase family. (416 aa)
CAEBREN_15361PCI domain-containing protein. (491 aa)
CAEBREN_0851126S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (986 aa)
Cbn-pas-3Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (250 aa)
Cbn-rpt-5CBN-RPT-5 protein; Belongs to the AAA ATPase family. (431 aa)
CAEBREN_19796MPN domain-containing protein. (358 aa)
CAEBREN_12279PCI domain-containing protein. (409 aa)
CAEBREN_01834Proteasome subunit beta. (204 aa)
CAEBREN_17617Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (246 aa)
CAEBREN_23567Uncharacterized protein. (104 aa)
CAEBREN_29615Uncharacterized protein. (251 aa)
CAEBREN_03269Proteasome subunit beta; Belongs to the peptidase T1B family. (236 aa)
CAEBREN_23993Proteasome subunit beta. (202 aa)
CAEBREN_16884Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (250 aa)
Cbn-rpt-1CBN-RPT-1 protein; Belongs to the AAA ATPase family. (435 aa)
Cbn-pas-6Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (146 aa)
CAEBREN_22031Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (241 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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