STRINGSTRING
Cbn-rpn-3 Cbn-rpn-3 Cbn-rpn-6.1 Cbn-rpn-6.1 Cbn-rpn-9 Cbn-rpn-9 Cbn-rpn-2 Cbn-rpn-2 CAEBREN_24517 CAEBREN_24517 Cbn-rpn-11 Cbn-rpn-11 CAEBREN_10201 CAEBREN_10201 CAEBREN_22940 CAEBREN_22940 Cbn-usp-14 Cbn-usp-14 CAEBREN_08511 CAEBREN_08511 Cbn-rpt-5 Cbn-rpt-5 CAEBREN_19796 CAEBREN_19796 Cbn-rpt-1 Cbn-rpt-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-rpn-3CBN-RPN-3 protein. (505 aa)
Cbn-rpn-6.1CBN-RPN-6.1 protein. (420 aa)
Cbn-rpn-9CBN-RPN-9 protein. (390 aa)
Cbn-rpn-226S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (1016 aa)
CAEBREN_24517PCI domain-containing protein. (491 aa)
Cbn-rpn-11CBN-RPN-11 protein. (312 aa)
CAEBREN_10201VWFA domain-containing protein. (348 aa)
CAEBREN_22940PCI domain-containing protein. (409 aa)
Cbn-usp-14Ubiquitin carboxyl-terminal hydrolase. (488 aa)
CAEBREN_0851126S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (986 aa)
Cbn-rpt-5CBN-RPT-5 protein; Belongs to the AAA ATPase family. (431 aa)
CAEBREN_19796MPN domain-containing protein. (358 aa)
Cbn-rpt-1CBN-RPT-1 protein; Belongs to the AAA ATPase family. (435 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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