(75 nodes) Mixed, incl. Cortical cytoskeleton organization, and RAC1 GTPase cycle network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_29392	Uncharacterized protein. (195 aa)
	Cbn-rhi-1	CBN-RHI-1 protein. (191 aa)
	CAEBREN_13393	Uncharacterized protein. (471 aa)
	CAEBREN_10405	Uncharacterized protein; Belongs to the profilin family. (101 aa)
	CAEBREN_00889	Uncharacterized protein; Belongs to the profilin family. (117 aa)
	Cbn-pfn-2	Profilin; Belongs to the profilin family. (131 aa)
	Cbn-tag-325	CBN-TAG-325 protein. (846 aa)
	Cbn-cyk-1	CBN-CYK-1 protein. (1444 aa)
	CAEBREN_23287	PH domain-containing protein. (1748 aa)
	CAEBREN_20474	Uncharacterized protein. (678 aa)
	Cbn-rrc-1	CBN-RRC-1 protein. (756 aa)
	CAEBREN_02368	Uncharacterized protein. (1383 aa)
	Cbn-fozi-1	CBN-FOZI-1 protein. (757 aa)
	CAEBREN_31057	Rho-GAP domain-containing protein. (801 aa)
	CAEBREN_28586	Uncharacterized protein. (148 aa)
	CAEBREN_32775	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (619 aa)
	CAEBREN_32361	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1928 aa)
	CAEBREN_22555	Uncharacterized protein. (196 aa)
	CAEBREN_21624	Uncharacterized protein. (267 aa)
	CAEBREN_16938	Uncharacterized protein. (192 aa)
	Cbn-pak-1	Non-specific serine/threonine protein kinase. (570 aa)
	Cbn-rga-1	CBN-RGA-1 protein. (399 aa)
	CAEBREN_10967	Uncharacterized protein. (166 aa)
	Cbn-mrck-1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1590 aa)
	Cbn-inft-1	CBN-INFT-1 protein. (861 aa)
	CAEBREN_08737	PH domain-containing protein. (993 aa)
	Cbn-ani-3	CBN-ANI-3 protein. (777 aa)
	Cbn-pix-1	CBN-PIX-1 protein. (643 aa)
	CAEBREN_18419	Uncharacterized protein. (258 aa)
	CAEBREN_20440	Uncharacterized protein. (806 aa)
	CAEBREN_05785	Uncharacterized protein. (502 aa)
	CAEBREN_31493	PH domain-containing protein. (1145 aa)
	CAEBREN_02564	Uncharacterized protein. (702 aa)
	Cbn-pfn-3	Profilin; Belongs to the profilin family. (126 aa)
	CAEBREN_20643	RING-type domain-containing protein. (220 aa)
	CAEBREN_00370	Non-specific serine/threonine protein kinase. (523 aa)
	CAEBREN_32827	Uncharacterized protein. (376 aa)
	CAEBREN_29004	FH2 domain-containing protein. (893 aa)
	CAEBREN_16594	Drf_GBD domain-containing protein. (177 aa)
	Cbn-daam-1	CBN-DAAM-1 protein. (787 aa)
	CAEBREN_15413	Uncharacterized protein. (284 aa)
	CAEBREN_06732	Uncharacterized protein. (247 aa)
	CAEBREN_07679	Uncharacterized protein. (331 aa)
	CAEBREN_23121	Uncharacterized protein. (843 aa)
	CAEBREN_30880	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1043 aa)
	CAEBREN_30352	Protein kinase domain-containing protein. (119 aa)
	CAEBREN_21045	Uncharacterized protein. (1287 aa)
	CAEBREN_11480	THUMP domain-containing protein. (391 aa)
	Cbn-srgp-1	CBN-SRGP-1 protein. (1059 aa)
	CAEBREN_21655	Uncharacterized protein. (331 aa)
	Cbn-frl-1	CBN-FRL-1 protein. (1188 aa)
	CAEBREN_31147	Uncharacterized protein. (126 aa)
	CAEBREN_16586	CNH domain-containing protein. (248 aa)
	CAEBREN_23069	Uncharacterized protein. (152 aa)
	CAEBREN_13043	Uncharacterized protein. (1287 aa)
	CAEBREN_17480	Uncharacterized protein. (136 aa)
	CAEBREN_28931	Uncharacterized protein. (26 aa)
	CAEBREN_29310	Uncharacterized protein. (139 aa)
	CAEBREN_14355	RING-type domain-containing protein. (437 aa)
	CAEBREN_10807	Uncharacterized protein. (234 aa)
	CAEBREN_21935	Uncharacterized protein. (240 aa)
	Cbn-max-2	CBN-MAX-2 protein. (257 aa)
	CAEBREN_11630	Uncharacterized protein. (672 aa)
	CAEBREN_21448	PH domain-containing protein. (993 aa)
	CAEBREN_30751	Uncharacterized protein. (442 aa)
	CAEBREN_23292	Uncharacterized protein. (191 aa)
	CAEBREN_31582	Uncharacterized protein. (393 aa)
	CAEBREN_28912	Drf_GBD domain-containing protein. (218 aa)
	CAEBREN_30939	Uncharacterized protein. (283 aa)
	CAEBREN_21323	Uncharacterized protein. (872 aa)
	CAEBREN_29365	Uncharacterized protein. (388 aa)
	CAEBREN_28278	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (250 aa)
	CAEBREN_28409	Uncharacterized protein. (242 aa)
	CAEBREN_28466	Non-specific serine/threonine protein kinase. (523 aa)
	CAEBREN_32354	FH2 domain-containing protein. (556 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00370	CAEBREN_02368	G0N8G4	G0MIX9	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.735
CAEBREN_00370	CAEBREN_02564	G0N8G4	G0N6T4	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.711
CAEBREN_00370	CAEBREN_05785	G0N8G4	G0N3S3	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.711
CAEBREN_00370	CAEBREN_07679	G0N8G4	G0NH46	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.511
CAEBREN_00370	CAEBREN_11480	G0N8G4	G0NU62	Non-specific serine/threonine protein kinase.	THUMP domain-containing protein.	0.658
CAEBREN_00370	CAEBREN_11630	G0N8G4	G0PDF1	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.511
CAEBREN_00370	CAEBREN_13393	G0N8G4	G0M8F2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.871
CAEBREN_00370	CAEBREN_14355	G0N8G4	G0PAY4	Non-specific serine/threonine protein kinase.	RING-type domain-containing protein.	0.711
CAEBREN_00370	CAEBREN_16938	G0N8G4	G0MR45	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.895
CAEBREN_00370	CAEBREN_20440	G0N8G4	G0N3R2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.711
CAEBREN_00370	CAEBREN_20474	G0N8G4	G0MI95	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.893
CAEBREN_00370	CAEBREN_20643	G0N8G4	G0N7Y4	Non-specific serine/threonine protein kinase.	RING-type domain-containing protein.	0.711
CAEBREN_00370	CAEBREN_21323	G0N8G4	G0PHU0	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.717
CAEBREN_00370	CAEBREN_21624	G0N8G4	G0MR40	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.895
CAEBREN_00370	CAEBREN_21655	G0N8G4	G0P184	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.511
CAEBREN_00370	CAEBREN_22555	G0N8G4	G0MR36	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.890
CAEBREN_00370	CAEBREN_23069	G0N8G4	G0P4W2	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.825
CAEBREN_00370	CAEBREN_23121	G0N8G4	G0NMP6	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.717
CAEBREN_00370	CAEBREN_23292	G0N8G4	G0PF62	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.960
CAEBREN_00370	CAEBREN_28278	G0N8G4	G0PLR9	Non-specific serine/threonine protein kinase.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.714

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