(11 nodes) Polarity specification of proximal/distal axis network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	Cbn-lin-18	CBN-LIN-18 protein. (561 aa)
	CAEBREN_28577	HMG box domain-containing protein. (435 aa)
	CAEBREN_30057	Uncharacterized protein. (71 aa)
	CAEBREN_31082	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (220 aa)
	CAEBREN_29494	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family. (329 aa)
	CAEBREN_11082	Uncharacterized protein. (896 aa)
	CAEBREN_13162	HMG box domain-containing protein. (435 aa)
	CAEBREN_07368	HMG box domain-containing protein. (989 aa)
	Cbn-lin-17	CBN-LIN-17 protein; Belongs to the G-protein coupled receptor Fz/Smo family. (557 aa)
	Cbn-wrm-1	CBN-WRM-1 protein. (843 aa)
	CAEBREN_10404	Uncharacterized protein. (854 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_07368	CAEBREN_10404	G0P0V1	G0MFJ9	HMG box domain-containing protein.	Uncharacterized protein.	0.979
CAEBREN_07368	CAEBREN_11082	G0P0V1	G0P1T0	HMG box domain-containing protein.	Uncharacterized protein.	0.979
CAEBREN_07368	CAEBREN_29494	G0P0V1	G0PC90	HMG box domain-containing protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.499
CAEBREN_07368	CAEBREN_30057	G0P0V1	G0PC92	HMG box domain-containing protein.	Uncharacterized protein.	0.499
CAEBREN_07368	CAEBREN_31082	G0P0V1	G0PC91	HMG box domain-containing protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.499
CAEBREN_07368	Cbn-lin-17	G0P0V1	G0NVS5	HMG box domain-containing protein.	CBN-LIN-17 protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.499
CAEBREN_07368	Cbn-lin-18	G0P0V1	G0M7V4	HMG box domain-containing protein.	CBN-LIN-18 protein.	0.559
CAEBREN_07368	Cbn-wrm-1	G0P0V1	G0MPG2	HMG box domain-containing protein.	CBN-WRM-1 protein.	0.986
CAEBREN_10404	CAEBREN_07368	G0MFJ9	G0P0V1	Uncharacterized protein.	HMG box domain-containing protein.	0.979
CAEBREN_10404	CAEBREN_13162	G0MFJ9	G0P0V4	Uncharacterized protein.	HMG box domain-containing protein.	0.979
CAEBREN_10404	CAEBREN_28577	G0MFJ9	G0PKP4	Uncharacterized protein.	HMG box domain-containing protein.	0.979
CAEBREN_10404	CAEBREN_29494	G0MFJ9	G0PC90	Uncharacterized protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.686
CAEBREN_10404	CAEBREN_30057	G0MFJ9	G0PC92	Uncharacterized protein.	Uncharacterized protein.	0.686
CAEBREN_10404	CAEBREN_31082	G0MFJ9	G0PC91	Uncharacterized protein.	G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.686
CAEBREN_10404	Cbn-lin-17	G0MFJ9	G0NVS5	Uncharacterized protein.	CBN-LIN-17 protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.686
CAEBREN_10404	Cbn-lin-18	G0MFJ9	G0M7V4	Uncharacterized protein.	CBN-LIN-18 protein.	0.563
CAEBREN_10404	Cbn-wrm-1	G0MFJ9	G0MPG2	Uncharacterized protein.	CBN-WRM-1 protein.	0.832
CAEBREN_11082	CAEBREN_07368	G0P1T0	G0P0V1	Uncharacterized protein.	HMG box domain-containing protein.	0.979
CAEBREN_11082	CAEBREN_13162	G0P1T0	G0P0V4	Uncharacterized protein.	HMG box domain-containing protein.	0.979
CAEBREN_11082	CAEBREN_28577	G0P1T0	G0PKP4	Uncharacterized protein.	HMG box domain-containing protein.	0.979

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