(17 nodes) L-glutamate transmembrane transport network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cbn-glt-3	CBN-GLT-3 protein. (532 aa)
	CAEBREN_08630	Amino acid transporter. (490 aa)
	CAEBREN_29010	Amino acid transporter. (464 aa)
	CAEBREN_01693	Amino acid transporter. (426 aa)
	Cbn-glt-6	CBN-GLT-6 protein. (542 aa)
	CAEBREN_10999	Amino acid transporter. (431 aa)
	CAEBREN_25505	Amino acid transporter. (490 aa)
	CAEBREN_05247	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (718 aa)
	Cbn-glt-4	Amino acid transporter. (478 aa)
	Cbn-vglu-2	CBN-VGLU-2 protein. (575 aa)
	Cbn-eat-4	CBN-EAT-4 protein. (644 aa)
	CAEBREN_23562	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (300 aa)
	Cbn-glt-1	Amino acid transporter. (492 aa)
	CAEBREN_10988	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)
	CAEBREN_00331	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)
	CAEBREN_13193	Amino acid transporter. (527 aa)
	CAEBREN_28667	PRA1 family protein. (136 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00331	CAEBREN_23562	G0PCR5	G0MB22	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.745
CAEBREN_01693	CAEBREN_13193	G0NRV6	G0PD18	Amino acid transporter.	Amino acid transporter.	0.427
CAEBREN_01693	Cbn-glt-1	G0NRV6	G0M7N6	Amino acid transporter.	Amino acid transporter.	0.426
CAEBREN_01693	Cbn-glt-3	G0NRV6	G0NUP9	Amino acid transporter.	CBN-GLT-3 protein.	0.426
CAEBREN_01693	Cbn-glt-4	G0NRV6	G0MSR8	Amino acid transporter.	Amino acid transporter.	0.447
CAEBREN_05247	CAEBREN_08630	G0MYV5	G0P7L3	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Amino acid transporter.	0.580
CAEBREN_05247	CAEBREN_10999	G0MYV5	G0N7C5	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Amino acid transporter.	0.580
CAEBREN_05247	CAEBREN_25505	G0MYV5	G0N7C4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Amino acid transporter.	0.580
CAEBREN_05247	CAEBREN_29010	G0MYV5	G0P7L4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Amino acid transporter.	0.580
CAEBREN_05247	Cbn-glt-1	G0MYV5	G0M7N6	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Amino acid transporter.	0.579
CAEBREN_08630	CAEBREN_05247	G0P7L3	G0MYV5	Amino acid transporter.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.580
CAEBREN_10988	CAEBREN_23562	G0P8C6	G0MB22	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.745
CAEBREN_10999	CAEBREN_05247	G0N7C5	G0MYV5	Amino acid transporter.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.580
CAEBREN_13193	CAEBREN_01693	G0PD18	G0NRV6	Amino acid transporter.	Amino acid transporter.	0.427
CAEBREN_13193	Cbn-glt-1	G0PD18	G0M7N6	Amino acid transporter.	Amino acid transporter.	0.452
CAEBREN_13193	Cbn-glt-3	G0PD18	G0NUP9	Amino acid transporter.	CBN-GLT-3 protein.	0.455
CAEBREN_13193	Cbn-glt-4	G0PD18	G0MSR8	Amino acid transporter.	Amino acid transporter.	0.474
CAEBREN_13193	Cbn-glt-6	G0PD18	G0NRV5	Amino acid transporter.	CBN-GLT-6 protein.	0.431
CAEBREN_23562	CAEBREN_00331	G0MB22	G0PCR5	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.745
CAEBREN_23562	CAEBREN_10988	G0MB22	G0P8C6	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.745

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