(16 nodes) Positive regulation of macroautophagy network (Caenorhabditis brenneri)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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Your Input:
	CAEBREN_03412	Uncharacterized protein. (458 aa)
	CAEBREN_22247	ATG11 domain-containing protein. (1385 aa)
	Cbn-mtm-3	CBN-MTM-3 protein. (1020 aa)
	CAEBREN_21581	HSF_DOMAIN domain-containing protein. (688 aa)
	CAEBREN_28470	Fork-head domain-containing protein. (441 aa)
	Cbn-atg-7	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (659 aa)
	Cbn-hlh-30	CBN-HLH-30 protein. (449 aa)
	lgg-2	Protein lgg. (123 aa)
	Cbn-lipl-4	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (409 aa)
	CAEBREN_06549	Uncharacterized protein. (467 aa)
	CAEBREN_05797	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (659 aa)
	CAEBREN_17786	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (535 aa)
	CAEBREN_02719	Uncharacterized protein. (1949 aa)
	CAEBREN_17299	UDENN FLCN/SMCR8-type domain-containing protein. (513 aa)
	Cbn-rbg-1	CBN-RBG-1 protein. (911 aa)
	lgg	Protein lgg. (130 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_02719	lgg-2	G0MHZ0	G0MZL5	Uncharacterized protein.	Protein lgg.	0.418
CAEBREN_03412	lgg	G0P6D2	B2ZFI7	Uncharacterized protein.	Protein lgg.	0.757
CAEBREN_03412	lgg-2	G0P6D2	G0MZL5	Uncharacterized protein.	Protein lgg.	0.680
CAEBREN_05797	CAEBREN_22247	G0PB43	G0N4Y8	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	ATG11 domain-containing protein.	0.580
CAEBREN_05797	Cbn-hlh-30	G0PB43	G0N230	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	CBN-HLH-30 protein.	0.563
CAEBREN_05797	lgg	G0PB43	B2ZFI7	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Protein lgg.	0.988
CAEBREN_05797	lgg-2	G0PB43	G0MZL5	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	Protein lgg.	0.998
CAEBREN_06549	lgg	G0MNH6	B2ZFI7	Uncharacterized protein.	Protein lgg.	0.757
CAEBREN_06549	lgg-2	G0MNH6	G0MZL5	Uncharacterized protein.	Protein lgg.	0.680
CAEBREN_17299	CAEBREN_22247	G0MEM9	G0N4Y8	UDENN FLCN/SMCR8-type domain-containing protein.	ATG11 domain-containing protein.	0.401
CAEBREN_17786	CAEBREN_21581	G0MLD1	G0NVM9	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	HSF_DOMAIN domain-containing protein.	0.416
CAEBREN_17786	CAEBREN_28470	G0MLD1	G0NKL6	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	Fork-head domain-containing protein.	0.981
CAEBREN_17786	Cbn-hlh-30	G0MLD1	G0N230	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	CBN-HLH-30 protein.	0.570
CAEBREN_21581	CAEBREN_17786	G0NVM9	G0MLD1	HSF_DOMAIN domain-containing protein.	Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.	0.416
CAEBREN_21581	CAEBREN_28470	G0NVM9	G0NKL6	HSF_DOMAIN domain-containing protein.	Fork-head domain-containing protein.	0.718
CAEBREN_21581	Cbn-hlh-30	G0NVM9	G0N230	HSF_DOMAIN domain-containing protein.	CBN-HLH-30 protein.	0.580
CAEBREN_22247	CAEBREN_05797	G0N4Y8	G0PB43	ATG11 domain-containing protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.580
CAEBREN_22247	CAEBREN_17299	G0N4Y8	G0MEM9	ATG11 domain-containing protein.	UDENN FLCN/SMCR8-type domain-containing protein.	0.401
CAEBREN_22247	Cbn-atg-7	G0N4Y8	G0NRN6	ATG11 domain-containing protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.580
CAEBREN_22247	lgg	G0N4Y8	B2ZFI7	ATG11 domain-containing protein.	Protein lgg.	0.845

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