STRINGSTRING
CAEBREN_16373 CAEBREN_16373 CAEBREN_05733 CAEBREN_05733 Cbn-lin-40 Cbn-lin-40 CAEBREN_02362 CAEBREN_02362 CAEBREN_00664 CAEBREN_00664 CAEBREN_05148 CAEBREN_05148 CAEBREN_15736 CAEBREN_15736 CAEBREN_08969 CAEBREN_08969 CAEBREN_09281 CAEBREN_09281 CAEBREN_30908 CAEBREN_30908 CAEBREN_29327 CAEBREN_29327 CAEBREN_03386 CAEBREN_03386 CAEBREN_01708 CAEBREN_01708
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_16373WD_REPEATS_REGION domain-containing protein. (417 aa)
CAEBREN_05733WD_REPEATS_REGION domain-containing protein. (412 aa)
Cbn-lin-40CBN-LIN-40 protein. (1075 aa)
CAEBREN_02362Uncharacterized protein. (1074 aa)
CAEBREN_00664Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (458 aa)
CAEBREN_05148P66_CC domain-containing protein. (764 aa)
CAEBREN_15736Uncharacterized protein. (990 aa)
CAEBREN_08969WD_REPEATS_REGION domain-containing protein. (422 aa)
CAEBREN_09281Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (458 aa)
CAEBREN_30908Uncharacterized protein. (302 aa)
CAEBREN_29327Uncharacterized protein. (320 aa)
CAEBREN_03386P66_CC domain-containing protein. (732 aa)
CAEBREN_01708Uncharacterized protein. (1252 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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