(33 nodes) Dynein complex network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_02443	Uncharacterized protein. (887 aa)
	CAEBREN_30500	Uncharacterized protein. (1264 aa)
	CAEBREN_31685	Uncharacterized protein. (370 aa)
	CAEBREN_02627	Dynein light chain. (94 aa)
	CAEBREN_19893	CAP-Gly domain-containing protein. (1296 aa)
	CAEBREN_15757	Dynein light chain roadblock. (95 aa)
	CAEBREN_11133	Uncharacterized protein. (106 aa)
	Cbn-che-3	CBN-CHE-3 protein. (1825 aa)
	CAEBREN_12779	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (441 aa)
	CAEBREN_02994	Uncharacterized protein. (478 aa)
	CAEBREN_12522	Uncharacterized protein. (161 aa)
	Cbn-dlc-3	Dynein light chain. (132 aa)
	CAEBREN_18284	Uncharacterized protein. (123 aa)
	CAEBREN_28345	Uncharacterized protein. (401 aa)
	Cbn-dlc-1	Dynein light chain. (89 aa)
	CAEBREN_18054	Uncharacterized protein. (128 aa)
	Cbn-dnc-2	CBN-DNC-2 protein. (327 aa)
	CAEBREN_00749	DHC_N2 domain-containing protein. (852 aa)
	CAEBREN_13735	Uncharacterized protein. (1075 aa)
	CAEBREN_17905	Uncharacterized protein. (415 aa)
	CAEBREN_20999	Uncharacterized protein. (1126 aa)
	CAEBREN_32350	DHC_N1 domain-containing protein. (995 aa)
	CAEBREN_22899	Dynein light chain. (90 aa)
	CAEBREN_29886	Uncharacterized protein. (2099 aa)
	CAEBREN_30051	Dynein_C domain-containing protein. (318 aa)
	Cbn-dlc-5	CBN-DLC-5 protein. (186 aa)
	CAEBREN_05363	Uncharacterized protein. (647 aa)
	CAEBREN_04291	Uncharacterized protein. (215 aa)
	CAEBREN_28930	Uncharacterized protein. (2028 aa)
	CAEBREN_28895	Uncharacterized protein. (54 aa)
	CAEBREN_29565	Uncharacterized protein. (562 aa)
	CAEBREN_00358	CAP-Gly domain-containing protein. (1317 aa)
	CAEBREN_32344	Uncharacterized protein. (2243 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00358	CAEBREN_00749	G0P6U3	G0ML57	CAP-Gly domain-containing protein.	DHC_N2 domain-containing protein.	0.918
CAEBREN_00358	CAEBREN_02443	G0P6U3	G0P4H4	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.841
CAEBREN_00358	CAEBREN_02627	G0P6U3	G0NYJ0	CAP-Gly domain-containing protein.	Dynein light chain.	0.782
CAEBREN_00358	CAEBREN_02994	G0P6U3	G0N9A8	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.918
CAEBREN_00358	CAEBREN_04291	G0P6U3	G0PH44	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.924
CAEBREN_00358	CAEBREN_05363	G0P6U3	G0PCJ5	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.990
CAEBREN_00358	CAEBREN_11133	G0P6U3	G0NKH5	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.503
CAEBREN_00358	CAEBREN_12522	G0P6U3	G0N9A7	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.918
CAEBREN_00358	CAEBREN_12779	G0P6U3	G0P8T1	CAP-Gly domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.987
CAEBREN_00358	CAEBREN_13735	G0P6U3	G0ML56	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.918
CAEBREN_00358	CAEBREN_15757	G0P6U3	G0NNZ5	CAP-Gly domain-containing protein.	Dynein light chain roadblock.	0.801
CAEBREN_00358	CAEBREN_17905	G0P6U3	G0ML53	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.853
CAEBREN_00358	CAEBREN_18054	G0P6U3	G0MLL5	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.991
CAEBREN_00358	CAEBREN_20999	G0P6U3	G0P9D0	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.940
CAEBREN_00358	CAEBREN_22899	G0P6U3	G0PAE3	CAP-Gly domain-containing protein.	Dynein light chain.	0.782
CAEBREN_00358	CAEBREN_28345	G0P6U3	G0MLW3	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.924
CAEBREN_00358	CAEBREN_28895	G0P6U3	G0PN54	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.893
CAEBREN_00358	CAEBREN_28930	G0P6U3	G0PIT0	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.893
CAEBREN_00358	CAEBREN_29886	G0P6U3	G0PBU8	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.940
CAEBREN_00358	CAEBREN_30051	G0P6U3	G0PBU9	CAP-Gly domain-containing protein.	Dynein_C domain-containing protein.	0.940

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