(36 nodes) Cleavage furrow network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_25336	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (813 aa)
	CAEBREN_18349	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (787 aa)
	CAEBREN_24940	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (813 aa)
	CAEBREN_29365	Uncharacterized protein. (388 aa)
	CAEBREN_16317	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (224 aa)
	CAEBREN_06960	FIP-RBD domain-containing protein. (431 aa)
	Cbn-mel-26	CBN-MEL-26 protein. (358 aa)
	CAEBREN_01678	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (297 aa)
	CAEBREN_08840	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (179 aa)
	CAEBREN_04060	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (168 aa)
	Cbn-unc-59	CBN-UNC-59 protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (450 aa)
	CAEBREN_15258	Uncharacterized protein. (394 aa)
	Cbn-unc-61	CBN-UNC-61 protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (524 aa)
	CAEBREN_01857	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (745 aa)
	CAEBREN_28278	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (250 aa)
	CAEBREN_30352	Protein kinase domain-containing protein. (119 aa)
	CAEBREN_30880	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1043 aa)
	Cbn-syn-4	CBN-SYN-4 protein; Belongs to the syntaxin family. (255 aa)
	Cbn-pod-1	CBN-POD-1 protein. (1200 aa)
	CAEBREN_17793	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (291 aa)
	CAEBREN_13353	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (144 aa)
	CAEBREN_26110	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (815 aa)
	Cbn-dyn-1	CBN-DYN-1 protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (837 aa)
	Cbn-cyk-1	CBN-CYK-1 protein. (1444 aa)
	Cbn-nmy-2	CBN-NMY-2 protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2003 aa)
	Cbn-cyk-4	CBN-CYK-4 protein. (679 aa)
	CAEBREN_16209	Uncharacterized protein. (717 aa)
	CAEBREN_22555	Uncharacterized protein. (196 aa)
	CAEBREN_21624	Uncharacterized protein. (267 aa)
	CAEBREN_16938	Uncharacterized protein. (192 aa)
	CAEBREN_20533	GYF domain-containing protein. (265 aa)
	CAEBREN_14621	TPR_REGION domain-containing protein. (961 aa)
	CAEBREN_31341	FIP-RBD domain-containing protein. (425 aa)
	CAEBREN_31493	PH domain-containing protein. (1145 aa)
	CAEBREN_05138	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (338 aa)
	CAEBREN_29260	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (626 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_01678	CAEBREN_01857	G0PBP2	G0NW18	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.605
CAEBREN_01678	CAEBREN_14621	G0PBP2	G0MYS1	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	TPR_REGION domain-containing protein.	0.817
CAEBREN_01678	CAEBREN_16209	G0PBP2	G0MLJ9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.568
CAEBREN_01678	CAEBREN_16938	G0PBP2	G0MR45	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.790
CAEBREN_01678	CAEBREN_21624	G0PBP2	G0MR40	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.790
CAEBREN_01678	CAEBREN_22555	G0PBP2	G0MR36	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.726
CAEBREN_01678	CAEBREN_28278	G0PBP2	G0PLR9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.664
CAEBREN_01678	CAEBREN_29260	G0PBP2	G0NA21	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.605
CAEBREN_01678	CAEBREN_29365	G0PBP2	G0PIF2	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.651
CAEBREN_01678	CAEBREN_30352	G0PBP2	G0NQ30	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Protein kinase domain-containing protein.	0.664
CAEBREN_01678	CAEBREN_30880	G0PBP2	G0NQ29	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.664
CAEBREN_01678	CAEBREN_31493	G0PBP2	G0N600	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	PH domain-containing protein.	0.651
CAEBREN_01678	Cbn-cyk-1	G0PBP2	G0MEQ9	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-CYK-1 protein.	0.598
CAEBREN_01678	Cbn-cyk-4	G0PBP2	G0ML50	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-CYK-4 protein.	0.586
CAEBREN_01678	Cbn-pod-1	G0PBP2	G0NGR6	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-POD-1 protein.	0.512
CAEBREN_01678	Cbn-unc-59	G0PBP2	G0NZS0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	CBN-UNC-59 protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.642
CAEBREN_01857	CAEBREN_01678	G0NW18	G0PBP2	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.605
CAEBREN_01857	CAEBREN_04060	G0NW18	G0P1D8	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.605
CAEBREN_01857	CAEBREN_05138	G0NW18	G0N6P3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.605
CAEBREN_01857	CAEBREN_16209	G0NW18	G0MLJ9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.659

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