(77 nodes) Establishment of mitotic spindle localization network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_16208	Nup54 domain-containing protein. (647 aa)
	CAEBREN_06624	Uncharacterized protein. (191 aa)
	CAEBREN_29790	Uncharacterized protein. (583 aa)
	Cbn-ced-5	CBN-CED-5 protein; Belongs to the DOCK family. (1785 aa)
	CAEBREN_28048	Uncharacterized protein. (367 aa)
	CAEBREN_04295	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (649 aa)
	CAEBREN_30387	Uncharacterized protein. (352 aa)
	CAEBREN_23292	Uncharacterized protein. (191 aa)
	CAEBREN_28632	Uncharacterized protein. (548 aa)
	CAEBREN_31540	Uncharacterized protein. (468 aa)
	CAEBREN_20313	Uncharacterized protein. (869 aa)
	Cbn-mel-26	CBN-MEL-26 protein. (358 aa)
	CAEBREN_30568	Nup54 domain-containing protein. (637 aa)
	CAEBREN_29486	PCI domain-containing protein. (737 aa)
	CAEBREN_04712	Tyrosine-protein kinase. (525 aa)
	CAEBREN_18682	Uncharacterized protein. (161 aa)
	CAEBREN_01948	Uncharacterized protein. (1319 aa)
	CAEBREN_09838	Uncharacterized protein. (313 aa)
	CAEBREN_31369	PCI domain-containing protein. (463 aa)
	Cbn-nud-2	CBN-NUD-2 protein. (303 aa)
	CAEBREN_00358	CAP-Gly domain-containing protein. (1317 aa)
	CAEBREN_06174	Nuclear pore protein. (756 aa)
	CAEBREN_22128	Uncharacterized protein. (1325 aa)
	CAEBREN_15365	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (571 aa)
	CAEBREN_14013	Uncharacterized protein. (259 aa)
	Cbn-mig-5	CBN-MIG-5 protein. (687 aa)
	CAEBREN_05859	Uncharacterized protein. (467 aa)
	CAEBREN_15258	Uncharacterized protein. (394 aa)
	CAEBREN_03865	Nup54 domain-containing protein. (580 aa)
	CAEBREN_03128	WD_REPEATS_REGION domain-containing protein. (340 aa)
	CAEBREN_00917	Uncharacterized protein; Belongs to the DOCK family. (1785 aa)
	CAEBREN_19893	CAP-Gly domain-containing protein. (1296 aa)
	CAEBREN_07731	Uncharacterized protein. (823 aa)
	Cbn-npp-3	CBN-NPP-3 protein. (1300 aa)
	CAEBREN_08831	Nuclear pore protein. (756 aa)
	Cbn-mom-2	CBN-MOM-2 protein. (347 aa)
	CAEBREN_16950	Uncharacterized protein. (1325 aa)
	Cbn-insc-1	CBN-INSC-1 protein. (717 aa)
	Cbn-ubxn-2	CBN-UBXN-2 protein. (290 aa)
	Cbn-par-2	CBN-PAR-2 protein. (719 aa)
	CAEBREN_04322	Uncharacterized protein. (62 aa)
	CAEBREN_14725	WD_REPEATS_REGION domain-containing protein. (273 aa)
	Cbn-gad-1	CBN-GAD-1 protein. (622 aa)
	CAEBREN_21129	Uncharacterized protein. (789 aa)
	Cbn-ooc-3	CBN-OOC-3 protein. (441 aa)
	CAEBREN_19597	Uncharacterized protein. (1327 aa)
	CAEBREN_32250	Uncharacterized protein. (514 aa)
	Cbn-dsh-2	CBN-DSH-2 protein. (751 aa)
	CAEBREN_18022	PID domain-containing protein. (505 aa)
	Cbn-par-3	CBN-PAR-3 protein. (1424 aa)
	Cbn-wrm-1	CBN-WRM-1 protein. (843 aa)
	CAEBREN_10086	Tyrosine-protein kinase. (525 aa)
	CAEBREN_25055	Uncharacterized protein. (1322 aa)
	CAEBREN_19035	Uncharacterized protein. (134 aa)
	CAEBREN_18054	Uncharacterized protein. (128 aa)
	Cbn-dnc-2	CBN-DNC-2 protein. (327 aa)
	Cbn-atx-2	CBN-ATX-2 protein. (989 aa)
	Cbn-pph-6	Serine/threonine-protein phosphatase. (334 aa)
	Cbn-cls-2	CBN-CLS-2 protein. (1021 aa)
	Cbn-ced-7	CBN-CED-7 protein. (1691 aa)
	Cbn-cls-3	CBN-CLS-3 protein. (920 aa)
	Cbn-hmp-2	CBN-HMP-2 protein. (682 aa)
	Cbn-npp-4	CBN-NPP-4 protein. (679 aa)
	Cbn-par-6	CBN-PAR-6 protein. (330 aa)
	CAEBREN_05267	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (362 aa)
	CAEBREN_02719	Uncharacterized protein. (1949 aa)
	Cbn-cls-1	CBN-CLS-1 protein. (1365 aa)
	CAEBREN_12860	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (571 aa)
	CAEBREN_29777	Uncharacterized protein. (303 aa)
	CAEBREN_01277	Uncharacterized protein. (2626 aa)
	Cbn-dcn-1	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (293 aa)
	lis-1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family. (404 aa)
	Cbn-pab-2	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (707 aa)
	Cbn-ags-3	CBN-AGS-3 protein. (596 aa)
	Cbn-mls-2	CBN-MLS-2 protein. (335 aa)
	CAEBREN_02749	Uncharacterized protein. (143 aa)
	CAEBREN_22321	Uncharacterized protein. (173 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00358	CAEBREN_02719	G0P6U3	G0MHZ0	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.627
CAEBREN_00358	CAEBREN_14013	G0P6U3	G0P0C0	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.618
CAEBREN_00358	CAEBREN_14725	G0P6U3	G0MYN4	CAP-Gly domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.890
CAEBREN_00358	CAEBREN_18054	G0P6U3	G0MLL5	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.991
CAEBREN_00358	CAEBREN_29777	G0P6U3	G0MFD7	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.628
CAEBREN_00358	Cbn-cls-1	G0P6U3	G0MG18	CAP-Gly domain-containing protein.	CBN-CLS-1 protein.	0.476
CAEBREN_00358	Cbn-cls-2	G0P6U3	G0MKJ0	CAP-Gly domain-containing protein.	CBN-CLS-2 protein.	0.618
CAEBREN_00358	Cbn-cls-3	G0P6U3	G0MJX0	CAP-Gly domain-containing protein.	CBN-CLS-3 protein.	0.476
CAEBREN_00358	Cbn-dnc-2	G0P6U3	G0MLL1	CAP-Gly domain-containing protein.	CBN-DNC-2 protein.	0.991
CAEBREN_00358	Cbn-nud-2	G0P6U3	G0P727	CAP-Gly domain-containing protein.	CBN-NUD-2 protein.	0.628
CAEBREN_00358	lis-1	G0P6U3	G0MCF5	CAP-Gly domain-containing protein.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family.	0.890
CAEBREN_00917	CAEBREN_04712	G0NS02	G0P982	Uncharacterized protein; Belongs to the DOCK family.	Tyrosine-protein kinase.	0.698
CAEBREN_00917	CAEBREN_06624	G0NS02	G0PMX8	Uncharacterized protein; Belongs to the DOCK family.	Uncharacterized protein.	0.928
CAEBREN_00917	CAEBREN_10086	G0NS02	G0MNP2	Uncharacterized protein; Belongs to the DOCK family.	Tyrosine-protein kinase.	0.698
CAEBREN_00917	CAEBREN_18022	G0NS02	G0MPI8	Uncharacterized protein; Belongs to the DOCK family.	PID domain-containing protein.	0.809
CAEBREN_00917	CAEBREN_23292	G0NS02	G0PF62	Uncharacterized protein; Belongs to the DOCK family.	Uncharacterized protein.	0.979
CAEBREN_00917	Cbn-ced-7	G0NS02	G0MK66	Uncharacterized protein; Belongs to the DOCK family.	CBN-CED-7 protein.	0.814
CAEBREN_01277	CAEBREN_04295	G0MES5	G0PH59	Uncharacterized protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.797
CAEBREN_01277	CAEBREN_05859	G0MES5	G0NXX7	Uncharacterized protein.	Uncharacterized protein.	0.797
CAEBREN_01277	Cbn-atx-2	G0MES5	G0MKU5	Uncharacterized protein.	CBN-ATX-2 protein.	0.495

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