(26 nodes) Cell cycle G1/S phase transition network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAEBREN_28067	WD_REPEATS_REGION domain-containing protein. (708 aa)
	CAEBREN_22987	Uncharacterized protein. (471 aa)
	CAEBREN_14487	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (418 aa)
	CAEBREN_32610	Uncharacterized protein. (812 aa)
	CAEBREN_28570	Protein kinase domain-containing protein. (814 aa)
	CAEBREN_30327	Uncharacterized protein. (877 aa)
	CAEBREN_25576	Uncharacterized protein. (431 aa)
	CAEBREN_11727	Protein kinase domain-containing protein. (530 aa)
	CAEBREN_08446	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (329 aa)
	CAEBREN_19158	Protein kinase domain-containing protein. (530 aa)
	CAEBREN_17983	ANK_REP_REGION domain-containing protein. (717 aa)
	CAEBREN_00581	Protein kinase domain-containing protein. (674 aa)
	CAEBREN_24848	Uncharacterized protein. (911 aa)
	CAEBREN_10744	Uncharacterized protein. (917 aa)
	CAEBREN_12161	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (360 aa)
	CAEBREN_03480	Protein kinase domain-containing protein. (402 aa)
	CAEBREN_31860	Uncharacterized protein. (2314 aa)
	Cbn-cyd-1	CBN-CYD-1 protein; Belongs to the cyclin family. (418 aa)
	CAEBREN_21584	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (333 aa)
	CAEBREN_18584	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (532 aa)
	CAEBREN_12491	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (532 aa)
	Cbn-pph-6	Serine/threonine-protein phosphatase. (334 aa)
	Cbn-cye-1	CBN-CYE-1 protein; Belongs to the cyclin family. (455 aa)
	CAEBREN_22827	Uncharacterized protein. (471 aa)
	Cbn-fzr-1	CBN-FZR-1 protein. (519 aa)
	Cbn-cdk-5	CBN-CDK-5 protein; Belongs to the protein kinase superfamily. (308 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_00581	CAEBREN_12491	G0P5P1	G0NH51	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.866
CAEBREN_00581	CAEBREN_14487	G0P5P1	G0PDD2	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.897
CAEBREN_00581	CAEBREN_18584	G0P5P1	G0P190	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.866
CAEBREN_00581	CAEBREN_25576	G0P5P1	G0N3Q3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.887
CAEBREN_00581	CAEBREN_28067	G0P5P1	G0PFU7	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.887
CAEBREN_00581	Cbn-cdk-5	G0P5P1	G0MCH7	Protein kinase domain-containing protein.	CBN-CDK-5 protein; Belongs to the protein kinase superfamily.	0.507
CAEBREN_00581	Cbn-cyd-1	G0P5P1	G0NR71	Protein kinase domain-containing protein.	CBN-CYD-1 protein; Belongs to the cyclin family.	0.897
CAEBREN_00581	Cbn-cye-1	G0P5P1	G0MFY7	Protein kinase domain-containing protein.	CBN-CYE-1 protein; Belongs to the cyclin family.	0.866
CAEBREN_00581	Cbn-fzr-1	G0P5P1	G0N3Q4	Protein kinase domain-containing protein.	CBN-FZR-1 protein.	0.887
CAEBREN_00581	Cbn-pph-6	G0P5P1	G0MKR9	Protein kinase domain-containing protein.	Serine/threonine-protein phosphatase.	0.403
CAEBREN_08446	CAEBREN_10744	G0MQY2	G0P4Y2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.443
CAEBREN_08446	CAEBREN_12491	G0MQY2	G0NH51	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.947
CAEBREN_08446	CAEBREN_14487	G0MQY2	G0PDD2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.978
CAEBREN_08446	CAEBREN_18584	G0MQY2	G0P190	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.947
CAEBREN_08446	CAEBREN_21584	G0MQY2	G0NVW6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.735
CAEBREN_08446	CAEBREN_24848	G0MQY2	G0P4Y4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.436
CAEBREN_08446	CAEBREN_25576	G0MQY2	G0N3Q3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.927
CAEBREN_08446	CAEBREN_28067	G0MQY2	G0PFU7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.927
CAEBREN_08446	Cbn-cdk-5	G0MQY2	G0MCH7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CBN-CDK-5 protein; Belongs to the protein kinase superfamily.	0.657
CAEBREN_08446	Cbn-cyd-1	G0MQY2	G0NR71	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	CBN-CYD-1 protein; Belongs to the cyclin family.	0.978

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