STRINGSTRING
Cbn-let-767 Cbn-let-767 Cbn-par-3 Cbn-par-3 CAEBREN_29602 CAEBREN_29602 Cbn-mtm-1 Cbn-mtm-1 CAEBREN_02749 CAEBREN_02749 CAEBREN_22321 CAEBREN_22321 CAEBREN_03557 CAEBREN_03557 CAEBREN_32039 CAEBREN_32039 CAEBREN_31375 CAEBREN_31375 CAEBREN_30617 CAEBREN_30617 Cbn-erm-1 Cbn-erm-1 Cbn-insc-1 Cbn-insc-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbn-let-767CBN-LET-767 protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
Cbn-par-3CBN-PAR-3 protein. (1424 aa)
CAEBREN_29602FERM domain-containing protein. (516 aa)
Cbn-mtm-1CBN-MTM-1 protein. (571 aa)
CAEBREN_02749Uncharacterized protein. (143 aa)
CAEBREN_22321Uncharacterized protein. (173 aa)
CAEBREN_03557Uncharacterized protein. (211 aa)
CAEBREN_32039Myotubularin phosphatase domain-containing protein. (97 aa)
CAEBREN_31375DH domain-containing protein. (489 aa)
CAEBREN_30617Uncharacterized protein. (257 aa)
Cbn-erm-1CBN-ERM-1 protein. (563 aa)
Cbn-insc-1CBN-INSC-1 protein. (717 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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