STRINGSTRING
CAEBREN_06207 CAEBREN_06207 Cbn-dbl-1 Cbn-dbl-1 Cbn-sma-5 Cbn-sma-5 CAEBREN_14137 CAEBREN_14137 CAEBREN_09421 CAEBREN_09421 Cbn-sma-3 Cbn-sma-3 CAEBREN_31444 CAEBREN_31444 CAEBREN_06951 CAEBREN_06951
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_06207Uncharacterized protein. (4169 aa)
Cbn-dbl-1CBN-DBL-1 protein. (371 aa)
Cbn-sma-5CBN-SMA-5 protein; Belongs to the protein kinase superfamily. (462 aa)
CAEBREN_14137Uncharacterized protein. (790 aa)
CAEBREN_09421TGF_BETA_2 domain-containing protein. (370 aa)
Cbn-sma-3Dwarfin sma. (395 aa)
CAEBREN_31444Dwarfin sma. (619 aa)
CAEBREN_06951Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (278 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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