STRINGSTRING
CAEBREN_19906 CAEBREN_19906 CAEBREN_30462 CAEBREN_30462 CAEBREN_16108 CAEBREN_16108 CAEBREN_29979 CAEBREN_29979 CAEBREN_25669 CAEBREN_25669 CAEBREN_20307 CAEBREN_20307 Cbn-tag-173 Cbn-tag-173 Cbn-mlcd-1 Cbn-mlcd-1 CAEBREN_23620 CAEBREN_23620 CAEBREN_21581 CAEBREN_21581 CAEBREN_28484 CAEBREN_28484 Cbn-mod-1 Cbn-mod-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_19906Uncharacterized protein. (496 aa)
CAEBREN_30462Nuclear receptor domain-containing protein. (322 aa)
CAEBREN_16108Uncharacterized protein. (491 aa)
CAEBREN_29979G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (371 aa)
CAEBREN_25669Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (451 aa)
CAEBREN_20307Transket_pyr domain-containing protein. (368 aa)
Cbn-tag-173CBN-TAG-173 protein. (367 aa)
Cbn-mlcd-1CBN-MLCD-1 protein. (442 aa)
CAEBREN_23620Uncharacterized protein. (587 aa)
CAEBREN_21581HSF_DOMAIN domain-containing protein. (688 aa)
CAEBREN_28484Uncharacterized protein. (55 aa)
Cbn-mod-1CBN-MOD-1 protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (336 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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