STRINGSTRING
CAEBREN_07378 CAEBREN_07378 CAEBREN_30568 CAEBREN_30568 Cbn-spd-5 Cbn-spd-5 CAEBREN_03865 CAEBREN_03865 CAEBREN_16208 CAEBREN_16208 CAEBREN_28567 CAEBREN_28567 Cbn-ubxn-3 Cbn-ubxn-3 Cbn-cdc-48.1 Cbn-cdc-48.1 Cbn-atx-2 Cbn-atx-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAEBREN_07378Uncharacterized protein. (1212 aa)
CAEBREN_30568Nup54 domain-containing protein. (637 aa)
Cbn-spd-5CBN-SPD-5 protein. (1214 aa)
CAEBREN_03865Nup54 domain-containing protein. (580 aa)
CAEBREN_16208Nup54 domain-containing protein. (647 aa)
CAEBREN_28567SUZ domain-containing protein. (450 aa)
Cbn-ubxn-3CBN-UBXN-3 protein. (616 aa)
Cbn-cdc-48.1CBN-CDC-48.1 protein; Belongs to the AAA ATPase family. (844 aa)
Cbn-atx-2CBN-ATX-2 protein. (989 aa)
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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