(16 nodes) Vesicle transport along microtubule network (Caenorhabditis brenneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Predicted Interactions

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Your Input:
	CAEBREN_20013	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1243 aa)
	CAEBREN_29284	Uncharacterized protein. (575 aa)
	CAEBREN_31580	Uncharacterized protein. (616 aa)
	Cbn-nud-2	CBN-NUD-2 protein. (303 aa)
	CAEBREN_20999	Uncharacterized protein. (1126 aa)
	CAEBREN_32350	DHC_N1 domain-containing protein. (995 aa)
	CAEBREN_20885	Adaptin_N domain-containing protein. (1223 aa)
	CAEBREN_29886	Uncharacterized protein. (2099 aa)
	CAEBREN_30051	Dynein_C domain-containing protein. (318 aa)
	CAEBREN_30789	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (805 aa)
	CAEBREN_02719	Uncharacterized protein. (1949 aa)
	CAEBREN_29777	Uncharacterized protein. (303 aa)
	lis-1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family. (404 aa)
	CAEBREN_29246	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1631 aa)
	Cbn-syd-2	CBN-SYD-2 protein. (1131 aa)
	CAEBREN_14725	WD_REPEATS_REGION domain-containing protein. (273 aa)

Your Current Organism:

Caenorhabditis brenneri

NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAEBREN_02719	CAEBREN_20013	G0MHZ0	G0NQN6	Uncharacterized protein.	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.469
CAEBREN_02719	CAEBREN_20885	G0MHZ0	G0PAC7	Uncharacterized protein.	Adaptin_N domain-containing protein.	0.469
CAEBREN_02719	CAEBREN_20999	G0MHZ0	G0P9D0	Uncharacterized protein.	Uncharacterized protein.	0.421
CAEBREN_02719	CAEBREN_29284	G0MHZ0	G0NH63	Uncharacterized protein.	Uncharacterized protein.	0.846
CAEBREN_02719	CAEBREN_29886	G0MHZ0	G0PBU8	Uncharacterized protein.	Uncharacterized protein.	0.421
CAEBREN_02719	CAEBREN_30051	G0MHZ0	G0PBU9	Uncharacterized protein.	Dynein_C domain-containing protein.	0.421
CAEBREN_02719	CAEBREN_31580	G0MHZ0	G0P5W4	Uncharacterized protein.	Uncharacterized protein.	0.846
CAEBREN_02719	CAEBREN_32350	G0MHZ0	G0P9D1	Uncharacterized protein.	DHC_N1 domain-containing protein.	0.421
CAEBREN_14725	CAEBREN_20999	G0MYN4	G0P9D0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.904
CAEBREN_14725	CAEBREN_29777	G0MYN4	G0MFD7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.954
CAEBREN_14725	CAEBREN_29886	G0MYN4	G0PBU8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.904
CAEBREN_14725	CAEBREN_30051	G0MYN4	G0PBU9	WD_REPEATS_REGION domain-containing protein.	Dynein_C domain-containing protein.	0.904
CAEBREN_14725	CAEBREN_32350	G0MYN4	G0P9D1	WD_REPEATS_REGION domain-containing protein.	DHC_N1 domain-containing protein.	0.904
CAEBREN_14725	Cbn-nud-2	G0MYN4	G0P727	WD_REPEATS_REGION domain-containing protein.	CBN-NUD-2 protein.	0.954
CAEBREN_20013	CAEBREN_02719	G0NQN6	G0MHZ0	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	Uncharacterized protein.	0.469
CAEBREN_20885	CAEBREN_02719	G0PAC7	G0MHZ0	Adaptin_N domain-containing protein.	Uncharacterized protein.	0.469
CAEBREN_20999	CAEBREN_02719	G0P9D0	G0MHZ0	Uncharacterized protein.	Uncharacterized protein.	0.421
CAEBREN_20999	CAEBREN_14725	G0P9D0	G0MYN4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.904
CAEBREN_20999	CAEBREN_29777	G0P9D0	G0MFD7	Uncharacterized protein.	Uncharacterized protein.	0.676
CAEBREN_20999	CAEBREN_29886	G0P9D0	G0PBU8	Uncharacterized protein.	Uncharacterized protein.	0.942

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